Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20cutaneum_20[genbank_20GCA_5F001613755.1_202016 -04-07] 21 sequences; 30,717,177 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq8 114 8e-21 seq2 96.9 2e-15 >seq8 Length=1019311 Score = 114 bits (126), Expect = 8e-21 Identities = 152/209 (73%), Gaps = 8/209 (4%) Strand=Plus/Plus Query 34778 GTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTG 34837 ||||| ||| || ||||| ||||| ||||| |||||| | || | || || ||||| Sbjct 996428 GTGAAGCGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGACCGTCCTCGAGCTG 996487 Query 34838 TTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTT 34897 || || || || || || || ||||||||| | || | ||||||||||| |||||| Sbjct 996488 CTTGCCCGCGAAGATGAGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGAATCTT 996547 Query 34898 CTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTC 34953 | ||||| || | ||||| || || ||| || |||| ||| ||||| || | Sbjct 996548 CGACTTGAC--AT--TGTCGATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGC 996603 Query 34954 CCGTGAGAGTCTTCACAAAGATCTGCATA 34982 ||||||| ||||| || |||||||||||| Sbjct 996604 CCGTGAGGGTCTTGACGAAGATCTGCATA 996632 Score = 95.1 bits (104), Expect = 8e-15 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||||||||| |||||||| || | || |||| || ||||| || |||||||| Sbjct 996213 TCCTTCTGAATGTTGTAGTCCGAGAGCGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAG 996272 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | ||||||||||| |||||| || ||| Sbjct 996273 ATAAGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTCCTGAATCTTGCTCTTAACGTTG 996332 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | |||| || | || || |||| || || || || || || | |||||| || Sbjct 996333 TCGATCGTGTCCGACGATTCGACCTCGAGCGTAATCGTCTTGCCGGTCAAAGTCTTGACG 996392 Query 34971 AAGATCTGCATA 34982 |||||||||||| Sbjct 996393 AAGATCTGCATA 996404 Score = 86.0 bits (94), Expect = 4e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||||||||| |||||||| || | || |||| || ||||| || ||||| || Sbjct 995985 TCCTTCTGAATGTTGTAGTCCGAGAGTGTACGACCATCCTCGAGCTGCTTGCCGGCGAAA 996044 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | ||||||||||| ||||| || ||| Sbjct 996045 ATCAGGCGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGGATCTTGGACTTCACGTTG 996104 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | |||| || | |||||| || | || || || || || || || ||||| || Sbjct 996105 TCGATCGTGTCGGACGACTCAACCTCAAGAGTGATCGTCTTGCCGGTAAGCGTCTTGACG 996164 Query 34971 AAGATCTGCATA 34982 || ||||||||| Sbjct 996165 AAAATCTGCATA 996176 >seq2 Length=6146035 Score = 96.9 bits (106), Expect = 2e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| |||||||| ||| | || | || || ||||| || ||||| || Sbjct 1714593 TCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAG 1714652 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | ||||||||||| ||||| |||||| Sbjct 1714653 ATGAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTG 1714712 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | |||| || || ||| || || | ||| ||||| || ||||| || ||||| || Sbjct 1714713 TCGATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACG 1714772 Query 34971 AAGATCTGCAT 34981 || |||||||| Sbjct 1714773 AAAATCTGCAT 1714783 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324633516914088