Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cutaneotrichosporon_20cutaneum_20[genbank_20GCA_5F001613755.1_202016
-04-07] 21 sequences; 30,717,177 total letters
Query= NC_023442.1
Length=120420
Score E
Sequences producing significant alignments: (Bits) Value
seq8 96.9 3e-15
>seq8
Length=1019311
Score = 96.9 bits (106), Expect = 3e-15
Identities = 153/217 (71%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| || || | ||||||||||| || || || ||||| || || | || |||||||
Sbjct 996416 ACGAAGGACGAGGTGAAGCGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGACC 996475
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
|| ||||| || ||||| || | || | | ||||| || || ||||| ||||| ||
Sbjct 996476 GTCCTCGAGCTGCTTGCCCGCGAAGATGAGGCGCTGCTGGTCTGGGGGAATGCCCTCCTT 996535
Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749
||| || ||| || | |||||| | || | ||||| || || || || || || |
Sbjct 996536 GTCCTG-AATCTTCGACTTGACATTGTCGATGGTGTCCGAGGACTCGACCTCGAGGGTGA 996594
Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
| || ||||| || | ||| || || || ||||||||
Sbjct 996595 TGGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 996631
Score = 87.8 bits (96), Expect = 1e-12
Identities = 141/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 29584 TGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGT 29643
|| ||||| || || || |||||||| || |||| | || ||| ||| ||||| ||
Sbjct 995973 TGGAGCGTCGACTCCTTCTGAATGTTGTAGTCCGAGAGTGTACGACCATCCTCGAGCTGC 996032
Query 29644 TTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTT 29703
||||| || | |||| | ||||| || || ||||||||||| ||||| || | ||
Sbjct 996033 TTGCCGGCGAAAATCAGGCGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGGATCTTG 996092
Query 29704 TGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTT 29763
|| || | || | ||||| || || || |||||||| || || ||||| ||
Sbjct 996093 GACTTCACGTTGTCGATCGTGTCGGACGACTCAACCTCAAGAGTGATCGTCTTGCCGGTA 996152
Query 29764 AAGGTTTTAACAAATATCTGCAT 29786
| || || || || ||||||||
Sbjct 996153 AGCGTCTTGACGAAAATCTGCAT 996175
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 385219101407961
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |