Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20cutaneum_20[genbank_20GCA_5F001613755.1_202016 -04-07] 21 sequences; 30,717,177 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq8 104 3e-17 seq2 93.3 6e-14 >seq8 Length=1019311 Score = 104 bits (114), Expect = 3e-17 Identities = 150/211 (71%), Gaps = 7/211 (3%) Strand=Plus/Plus Query 39659 TCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCA 39718 ||||| || ||||||||||| ||||| ||||| ||||| |||||||| || |||| ||| Sbjct 936492 TCGTTCGAGAATGTGAGTCCGGGCATGAGACCGCGCTTCTTGAGCCAGAAAATGGACGCA 936551 Query 39719 AAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTA- 39777 || || ||||| |||||||| || || || || ||||| |||| || | ||| | | Sbjct 936552 AACGAGCCAGAGAAGAAGATACCCTCGACGGCAGCAAAGGCAATGAGACGCTCGGCAAAC 936611 Query 39778 ----ACTTGTATCATTATGTATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAG 39833 ||||| || | ||||| | ||||| || || |||||||| | || | Sbjct 936612 GACGACTTG--TCGTCCGAGATCCAGCGGAGAGCCCAGTCGGCCTTCTTCTTAATGCAGG 936669 Query 39834 GCATTGTTTCTATAGCATTAAAGAGATAATG 39864 | || | || || || ||||||||||| || Sbjct 936670 GAATGTTCTCAATGGCGTTAAAGAGATACTG 936700 >seq2 Length=6146035 Score = 93.3 bits (102), Expect = 6e-14 Identities = 74/89 (83%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 39659 TCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCA 39718 ||||| || |||||||| || ||||||| || ||||| || ||||| || ||||| ||| Sbjct 1862631 TCGTTGGAGAATGTGAGCCCGCGCATTAGTCCGCGCTTCTTTAGCCAGAAAATGGCCGCA 1862572 Query 39719 AAAGATCCAGAAAAGAAGATGCCTTCTAC 39747 || ||||| ||||||||||||||||| || Sbjct 1862571 AACGATCCGGAAAAGAAGATGCCTTCAAC 1862543 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686908619686440