Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20cutaneum_20[genbank_20GCA_5F001613755.1_202016 -04-07] 21 sequences; 30,717,177 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq8 145 2e-29 seq2 111 5e-19 >seq8 Length=1019311 Score = 145 bits (160), Expect = 2e-29 Identities = 173/232 (75%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | |||||||| || ||||| ||||| || ||||| || || || Sbjct 996173 CATACCACCACGCAGACGGAGAACAAGGTGGAGAGTCGACTCCTTCTGAATGTTGTAGTC 996232 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || ||||| || || || || || |||||||| ||||| ||||| ||||| Sbjct 996233 CGAGAGCGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATAAGACGCTGCTGGTCAGG 996292 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCT-TTTACATTATCAATCGAATCAGATGGTT 140685 ||| || || || || |||||||| || ||| || || || || |||| || || | || Sbjct 996293 AGGGATACCCTCCTTGTCCTGAATCTT-GCTCTTAACGTTGTCGATCGTGTCCGACGATT 996351 Query 140686 CAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | || || || |||| ||||| ||||| | || || || || |||||||| Sbjct 996352 CGACCTCGAGCGTAATCGTCTTGCCGGTCAAAGTCTTGACGAAGATCTGCAT 996403 Score = 131 bits (144), Expect = 5e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 140511 CCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGAT 140570 || ||||| | || ||||| || || || || ||||| || ||||| || || || || Sbjct 995949 CCGCCACGAAGTCGAAGAACGAGGTGGAGCGTCGACTCCTTCTGAATGTTGTAGTCCGAG 996008 Query 140571 AATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGA 140630 | ||| || ||||| || || || || || || || || || || ||||| ||||||||| Sbjct 996009 AGTGTACGACCATCCTCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCAGGAGGA 996068 Query 140631 ATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACT 140690 || || || || ||||| || || | || || || || |||| || || | ||||| Sbjct 996069 ATACCCTCCTTGTCCTGGATCTTGGACTTCACGTTGTCGATCGTGTCGGACGACTCAACC 996128 Query 140691 TCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||||| || | ||||| ||||| || || || || ||||||||||| Sbjct 996129 TCAAGAGTGATCGTCTTGCCGGTAAGCGTCTTGACGAAAATCTGCAT 996175 Score = 100 bits (110), Expect = 9e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || || ||||| || ||||| || || || || || || Sbjct 996629 CATACCACCACGGAGGCGAAGGACGAGGTGAAGCGTGGACTCCTTCTGGATGTTGTAGTC 996688 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || ||||| || || || || ||||| ||||| || || ||||| || || Sbjct 996689 GGACAGAGTACGGCCATCCTCGAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCGGG 996748 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 ||||| || || || ||||| || || | || || || || || | || || | || Sbjct 996749 GGGAATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTGTCCGAAGACTC 996808 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAG 140716 ||| || || || | ||||| ||||| || Sbjct 996809 AACCTCGAGGGTGATGGTCTTGCCGGTGAG 996838 >seq2 Length=6146035 Score = 111 bits (122), Expect = 5e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | ||| || || || || || ||||| || || || || || || Sbjct 1714553 CATACCACCACGAAGGCGTAGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTC 1714612 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || || || || || || || || || ||||| || || ||||| || || Sbjct 1714613 CGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGG 1714672 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 || || || || || ||||| || || || || || || || |||| || || | || Sbjct 1714673 GGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTC 1714732 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || ||||| || | ||||| || || || || || || ||||||||||| Sbjct 1714733 GACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACGAAAATCTGCAT 1714783 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515253992301863