Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20cutaneum_20[genbank_20GCA_5F001613755.1_202016 -04-07] 21 sequences; 30,717,177 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq8 86.0 4e-12 >seq8 Length=1019311 Score = 86.0 bits (94), Expect = 4e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 |||||| | ||| || | || | ||||| || |||||| |||||||| || || || Sbjct 995948 GCCGCCACGAAGTCGAAGAACGAGGTGGAGCGTCGACTCCTTCTGAATGTTGTAGTCCGA 996007 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 ||||| || | || || || || || ||||| || || | ||||| ||||| || || Sbjct 996008 GAGTGTACGACCATCCTCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCAGGAGG 996067 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657 | ||||||||||| |||| || | || ||| | || ||||| ||| | Sbjct 996068 AATACCCTCCTTGTCCTGGATC-TTGGACTTCACGTTGTCGATCGTGTCGGACGACTCAA 996126 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 | || | || ||||| || ||||| | ||| || || ||||||||||| Sbjct 996127 CCTCAAGAGTGATCGTCTTGCCGGTAAGCGTCTTGACGAAAATCTGCAT 996175 Score = 86.0 bits (94), Expect = 4e-12 Identities = 145/205 (71%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563 |||||||| |||||| |||||||| || || || || || || | || || || || Sbjct 996201 TGGAGAGTCGACTCCTTCTGAATGTTGTAGTCCGAGAGCGTGCGGCCATCCTCGAGCTGC 996260 Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623 || |||||||| || | |||||| ||||| || || | ||||||||||| ||| || Sbjct 996261 TTGCCGGCAAAGATAAGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTC-CTGAATCTT 996319 Query 34624 TGTTTTAACGAT-AAAATTGTGT-CTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGG 34681 | |||||| | || |||| | || | || || || | || ||||| || |||| Sbjct 996320 GCTCTTAACGTTGTCGATCGTGTCCGACGAT-TCGACCTCGAGCGTAATCGTCTTGCCGG 996378 Query 34682 TTAACGTTTTCACAAAAATCTGCAT 34706 | || || || || || |||||||| Sbjct 996379 TCAAAGTCTTGACGAAGATCTGCAT 996403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314729519448893