Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20cutaneum_20[genbank_20GCA_5F001613755.1_202016 -04-07] 21 sequences; 30,717,177 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq8 185 2e-41 seq2 176 1e-38 seq1 125 2e-23 >seq8 Length=1019311 Score = 185 bits (204), Expect = 2e-41 Identities = 174/222 (78%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||||| || || ||||| || || ||||| || || ||||| || |||| || || Sbjct 995954 ACGAAGTCGAAGAACGAGGTGGAGCGTCGACTCCTTCTGAATGTTGTAGTCCGAGAGTGT 996013 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | ||||| || ||||||||||| ||||| || ||||| || ||||||||||||| || Sbjct 996014 ACGACCATCCTCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCAGGAGGAATACC 996073 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||||||||||||||||| |||||||| ||||| ||||| || |||||||| || Sbjct 996074 CTCCTTGTCCTGGATCTTGGACTTCACGTTGTCGATCGTGTCGGACGACTCAACCTCAAG 996133 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 |||||||||||| || || || ||||| || || | |||||| Sbjct 996134 AGTGATCGTCTTGCCGGTAAGCGTCTTGACGAAAATCTGCAT 996175 Score = 185 bits (204), Expect = 2e-41 Identities = 168/212 (79%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| |||||||| |||||||| || |||||||| || || | |||||| | || || Sbjct 996420 AGGACGAGGTGAAGCGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGACCGTCC 996479 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| ||||| || ||||| || |||| || ||||||||| Sbjct 996480 TCGAGCTGCTTGCCCGCGAAGATGAGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCC 996539 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| || || || ||||||||||| ||| || |||||||| ||||| ||| Sbjct 996540 TGAATCTTCGACTTGACATTGTCGATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTC 996599 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || |||||||| ||||| || || | |||||| Sbjct 996600 TTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 996631 Score = 168 bits (186), Expect = 2e-36 Identities = 152/191 (80%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| |||||||| |||||||| || |||||||| || || | || || | ||||| Sbjct 996648 AGGACGAGGTGAAGCGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTACGGCCATCC 996707 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| ||||| || ||||| || |||| || ||||||||| Sbjct 996708 TCGAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCC 996767 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| ||||||||||| || ||||||||||| ||||| ||| Sbjct 996768 TGGATCTTCGACTTGACGTTGTCGATGGTGTCCGAAGACTCAACCTCGAGGGTGATGGTC 996827 Query 211083 TTTCCCGTGAG 211093 || || ||||| Sbjct 996828 TTGCCGGTGAG 996838 Score = 167 bits (184), Expect = 5e-36 Identities = 164/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || |||||||| ||||| ||||| || || ||||| || |||| || || | ||||| Sbjct 996192 AGAACAAGGTGGAGAGTCGACTCCTTCTGAATGTTGTAGTCCGAGAGCGTGCGGCCATCC 996251 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| || |||||||| || || ||||||||||| | || ||||||||| Sbjct 996252 TCGAGCTGCTTGCCGGCAAAGATAAGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTCC 996311 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| || ||||| ||||| ||||| || ||| |||||||| || |||||| Sbjct 996312 TGAATCTTGCTCTTAACGTTGTCGATCGTGTCCGACGATTCGACCTCGAGCGTAATCGTC 996371 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || | |||||| || || | |||||| Sbjct 996372 TTGCCGGTCAAAGTCTTGACGAAGATCTGCAT 996403 >seq2 Length=6146035 Score = 176 bits (194), Expect = 1e-38 Identities = 172/222 (77%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | |||||| ||||| || || ||||| || |||||||| || |||| ||||| Sbjct 1714562 ACGAAGGCGTAGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGT 1714621 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | || || || ||||||||||| |||||||| ||||| || ||||| || || | || Sbjct 1714622 GCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGGGGGATGCC 1714681 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||||||||||||||||| || ||||| ||||| ||||| ||| || ||||| || Sbjct 1714682 CTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCAAG 1714741 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| ||||| ||||| || ||||| || || | |||||| Sbjct 1714742 GGTGATGGTCTTGCCCGTAAGGGTCTTGACGAAAATCTGCAT 1714783 >seq1 Length=6933627 Score = 125 bits (138), Expect = 2e-23 Identities = 126/164 (77%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 210939 TAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGG 210998 || |||| |||||| | || || || ||||||||||| |||||||| || || || ||| Sbjct 1728692 TAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGG 1728633 Query 210999 TCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAG 211058 ||||| || | || ||||||||||||||||| || ||||| ||||| ||||| || Sbjct 1728632 TCAGGGGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTGTCGATCGTGTCCGAC 1728573 Query 211059 CTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTAC 211102 || ||||| || ||||| ||||| || ||||| ||||| || Sbjct 1728572 GACTCGACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTGAC 1728529 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159151688115665