Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20cutaneum_20[genbank_20GCA_5F001613755.1_202016 -04-07] 21 sequences; 30,717,177 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq8 107 1e-18 seq2 86.0 4e-12 >seq8 Length=1019311 Score = 107 bits (118), Expect = 1e-18 Identities = 144/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || ||||||||||| || || ||||| ||||| || || ||| || Sbjct 996631 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCG 996572 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| | || | || ||| ||||| || || | || ||||| || Sbjct 996571 GACACCATCGACAATGTCAAGTC-GAAGATTCAGGACAAGGAGGGCATTCCCCCAGACCA 996513 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||||| | || || || ||||| || || || |||| ||||| | ||| ||||| Sbjct 996512 GCAGCGCCTCATCTTCGCGGGCAAGCAGCTCGAGGACGGTCGCACCCTTTCCGACTACAA 996453 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || || |||||||| Sbjct 996452 CATCCAGAAGGAGTCCAC 996435 Score = 84.2 bits (92), Expect = 1e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || || | || || || ||||| || ||||| || || || || Sbjct 996403 ATGCAGATCTTCGTCAAGACTTTGACCGGCAAGACGATTACGCTCGAGGTCGAATCGTCG 996344 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || || |||| | || | || ||||| || ||| | || || || || Sbjct 996343 GACACGATCGACAACGTTAAGAGCAAGA-TTCAGGACAAGGAGGGTATCCCTCCTGACCA 996285 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||||| | || ||||||||||| || || || || | ||||| | || ||||| Sbjct 996284 GCAGCGTCTTATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACGCTCTCGGACTACAA 996225 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || || ||||| || Sbjct 996224 CATTCAGAAGGAGTCGAC 996207 >seq2 Length=6146035 Score = 86.0 bits (94), Expect = 4e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| || ||||| ||||| || || ||||| || || || || ||| || Sbjct 1714783 ATGCAGATTTTCGTCAAGACCCTTACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCG 1714724 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | | || || || ||||| || || | || || || || Sbjct 1714723 GACACGATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAG 1714664 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||||| | || || |||||||| || || || |||| ||||| | || |||||| Sbjct 1714663 CAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCGGACTACAAC 1714604 Query 23791 ATACAAAAAGAGTCCAC 23807 || || || ||||| || Sbjct 1714603 ATCCAGAAGGAGTCGAC 1714587 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338009513490668