Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20cutaneum_20[genbank_20GCA_5F001613755.1_202016 -04-07] 21 sequences; 30,717,177 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq8 167 2e-36 seq2 154 1e-32 seq9 105 6e-18 seq1 93.3 4e-14 >seq8 Length=1019311 Score = 167 bits (184), Expect = 2e-36 Identities = 176/229 (77%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 |||||| || || || | || || || ||||| ||||||||||||||| ||||| || Sbjct 995948 GCCGCCACGAAGTCGAAGAACGAGGTGGAGCGTCGACTCCTTCTGAATGTTGTAGTCCGA 996007 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 ||| || || | || |||||||||||||||||||| ||||||||||| ||||| | || Sbjct 996008 GAGTGTACGACCATCCTCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCAGGAGG 996067 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 || | |||||||||| ||| || |||| ||| | | | |||||| |||||| | Sbjct 996068 AATACCCTCCTTGTCCTGGATCTTGGACTTC-ACGTTGTCGATCGTGTCGGACGACTCAA 996126 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| | || ||||| || || || |||||||| |||||||||||||| Sbjct 996127 CCTCAAGAGTGATCGTCTTGCCGGTAAGCGTCTTGACGAAAATCTGCAT 996175 Score = 159 bits (176), Expect = 3e-34 Identities = 176/230 (77%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| ||||| | || || || |||||| ||||||||| ||||| |||||||| Sbjct 996405 CCACCGCGGAGACGAAGGACGAGGTGAAGCGTGGACTCCTTCTGGATGTTGTAGTCGGAA 996464 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| |||| |||||||||||||| ||||| || |||||||| ||||| | |||| Sbjct 996465 AGGGTGCGACCGTCCTCGAGCTGCTTGCCCGCGAAGATGAGGCGCTGCTGGTCTGGGGGA 996524 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTG-CTT--CAACGACGACACAGTGTCGCTCGACTCC 41812 | || |||||||||| ||| | || | ||| || | || | ||||| ||||| Sbjct 996525 ATGCCCTCCTTGTCC-TGAATCTTCGACTTGACATTGTCG--ATGGTGTCCGAGGACTCG 996581 Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||| | || || || || ||||| || ||||| ||||| |||||||| Sbjct 996582 ACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 996631 Score = 132 bits (146), Expect = 4e-26 Identities = 170/229 (74%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || || || || || ||||||||||||||| ||||| ||| Sbjct 996177 CCACCACGCAGACGGAGAACAAGGTGGAGAGTCGACTCCTTCTGAATGTTGTAGTCCGAG 996236 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| | || ||||||||||||||||| || || || ||||| ||||| | || Sbjct 996237 AGCGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATAAGACGCTGCTGGTCAGGAGGG 996296 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCT-TCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | | |||||||||| ||| | ||||| | |||| | | | ||||| ||| || | Sbjct 996297 ATACCCTCCTTGTCC-TGA-ATCTTGCTCTTAACGTTGTCGATCGTGTCCGACGATTCGA 996354 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| | ||| ||||| || || |||| ||||| ||||| |||||||| Sbjct 996355 CCTCGAGCGTAATCGTCTTGCCGGTCAAAGTCTTGACGAAGATCTGCAT 996403 Score = 114 bits (126), Expect = 1e-20 Identities = 111/143 (78%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | || || || |||||| ||||||||| ||||| |||||||| Sbjct 996633 CCACCACGGAGGCGAAGGACGAGGTGAAGCGTGGACTCCTTCTGGATGTTGTAGTCGGAC 996692 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || || | || |||||||||||||| ||||| || |||||||| ||||| | |||| Sbjct 996693 AGAGTACGGCCATCCTCGAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCGGGGGGA 996752 Query 41756 ACGCTCTCCTTGTCCATGATTTT 41778 | || |||||||||| ||| || Sbjct 996753 ATGCCCTCCTTGTCCTGGATCTT 996775 >seq2 Length=6146035 Score = 154 bits (170), Expect = 1e-32 Identities = 173/229 (76%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || |||| || || || || || ||||||||| ||||| ||||| ||| Sbjct 1714557 CCACCACGAAGGCGTAGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAG 1714616 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| |||| |||||||||||||||||||| || |||||||| ||||| | ||| Sbjct 1714617 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGGGGG 1714676 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||||||| || | || || | ||| | | | ||||| ||||| || Sbjct 1714677 ATGCCCTCCTTGTCC-TGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGAC 1714735 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||| | || || || || ||||| || ||||| ||||||||||||||| Sbjct 1714736 CTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACGAAAATCTGCATG 1714784 >seq9 Length=632869 Score = 105 bits (116), Expect = 6e-18 Identities = 96/121 (79%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 85787 GGGCTGCTACATTCGTATCGCACCTCGTTCCGGCCTCGCCAGCAAGCACGGTATCGACGT 85846 |||| |||| || ||||| || |||||||||||| || |||||||| || ||||| Sbjct 65781 GGGCACCTACGGCCGCATCGCGCCGCGTTCCGGCCTCACCGCAAAGCACGGCATTGACGT 65722 Query 85847 GGGCGCCGGGGTCATCGACGCCGACTACCGCGGAAACGTCATCATCGTACTCTTCAACCA 85906 |||||||| ||| |||||||||||||||| || | |||| |||| ||||||||||| Sbjct 65721 CGGCGCCGGCGTCGTCGACGCCGACTACCGTGGCGAAGTCAAGGTCGTGCTCTTCAACCA 65662 Query 85907 C 85907 | Sbjct 65661 C 65661 >seq1 Length=6933627 Score = 93.3 bits (102), Expect = 4e-14 Identities = 121/165 (73%), Gaps = 2/165 (1%) Strand=Plus/Minus Query 41687 TAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGG 41746 ||||| || |||||||| |||| |||||||||||||| ||||| || || ||||| ||| Sbjct 1728692 TAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGG 1728633 Query 41747 TCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCT 41805 || | ||| | || |||||||||| || | || || | ||| | | | ||||| Sbjct 1728632 TCAGGGGGGATGCCCTCCTTGTCC-TGGATCTTCGCCTTGACGTTGTCGATCGTGTCCGA 1728574 Query 41806 CGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTAC 41850 |||||| ||||| | || || || || || || || ||||| || Sbjct 1728573 CGACTCGACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTGAC 1728529 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462303878645200