Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20cutaneum_20[genbank_20GCA_5F001636075.1_202016 -05-02] 592 sequences; 38,696,417 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq116 109 6e-19 >seq116 Length=111500 Score = 109 bits (120), Expect = 6e-19 Identities = 262/392 (67%), Gaps = 6/392 (2%) Strand=Plus/Minus Query 16985 CCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTC 17044 |||||||| | ||| || ||||| || || || | |||||||| || || ||| Sbjct 111382 CCCTCGTCACGCGAGATGAGCTCGTTGGAGAAGGTGAGGCCGGGCATGAGGCCACGCTTC 111323 Query 17045 TTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAAC 17104 || | ||| || || | |||||| || ||||| ||||| ||||||||||| | || || Sbjct 111322 TTGAGCCAGAAGATGGAGGCGAAGGATCCAGAGAAGAAGATACCCTCGACAGCGGCGAAG 111263 Query 17105 GCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGA-ATCCATTTCTGCACCCACTC 17163 ||||| | || |||||| ||| || | | | | ||| ||||| | |||| || Sbjct 111262 GCGATGAGACGCTCGGCGAACGACGAG-CGCTCGTCCGAGATCCAGCGAAGAGCCCAGTC 111204 Query 17164 GGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATAATTTCTCTTTTTCCTG 17223 ||| || | ||| ||||| || || || |||||||| || | | || | | Sbjct 111203 GGCCTTCTTCTTGATGCAGGGGATGGTCTCGATGGCCTTGAAGAGGT--AGTTGCGGCGG 111146 Query 17224 TAG--GTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCC 17281 | ||| || || || |||||||| || ||| | |||||||| ||||||||| Sbjct 111145 GCGTTGTCACGGATGTAAGTGTCGATGAGGAGCGAGTAAGTCTCGGAGTGGATGTTCTCC 111086 Query 17282 ATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAAT 17341 || ||||| || ||||| ||| ||| || || || || || || || |||| Sbjct 111085 ATCATGATCTGGAAGCCGTAGAAGGTCTTGGCCTCGGCGATCTGGACCTCTCCGCAGAAG 111026 Query 17342 CGTTCCGCTAGATTTTCGTTCACGATGCCGTC 17373 || || | || || ||||| || ||||| || Sbjct 111025 CGCTCGACGAGGTTCTCGTTGACAATGCCATC 110994 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517541770162560