Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20cutaneum_20[genbank_20GCA_5F001636075.1_202016 -05-02] 592 sequences; 38,696,417 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq305 131 2e-25 seq116 131 2e-25 >seq305 Length=41136 Score = 131 bits (144), Expect = 2e-25 Identities = 181/251 (72%), Gaps = 3/251 (1%) Strand=Plus/Minus Query 24135 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 24194 || ||||| ||| ||| ||||||||||| | || | |||||||| || ||||| Sbjct 41039 CAGGCGAAGTCGGTGTGGAGACCCTCGTCACGCGAGATGAGCTCGTTGGAGAAGGTGAGG 40980 Query 24195 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 24254 |||||||| ||||||||||| || ||||| || ||||| || || || ||||| ||||| Sbjct 40979 CCGGGCATAAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCGAACGAGCCAGAGAAGAAG 40920 Query 24255 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCC--ATAACCGGCGCT-GTCATGT 24311 || || || || || || |||||||| || | || | | || ||||| ||| Sbjct 40919 ATACCCTCAACGGCGGCGAAGGCAATCAGACGCTCAGCGAACGACGAGCGCTCGTCCGAG 40860 Query 24312 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTA 24371 ||||| ||||||| || |||||||| || | || || || ||||| || || || Sbjct 40859 ATCCAGCGAAGAGCCCAGTCAGCCTTCTTCTTGATGCAGGGGATGGTCTCGATGGCCTTG 40800 Query 24372 AAGAGATAGTT 24382 ||||| ||||| Sbjct 40799 AAGAGGTAGTT 40789 >seq116 Length=111500 Score = 131 bits (144), Expect = 2e-25 Identities = 181/251 (72%), Gaps = 3/251 (1%) Strand=Plus/Minus Query 24135 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 24194 || || || ||| ||| ||||||||||| | || | |||||||| || ||||| Sbjct 111403 CAGGCAAAGTCGGTGTGGAGACCCTCGTCACGCGAGATGAGCTCGTTGGAGAAGGTGAGG 111344 Query 24195 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 24254 |||||||| ||||||||||| || ||||| || ||||| || || |||||||| ||||| Sbjct 111343 CCGGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGATCCAGAGAAGAAG 111284 Query 24255 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCC--ATAACCGGCGCT-GTCATGT 24311 || || || || || || ||||| || || | || | | || ||||| ||| Sbjct 111283 ATACCCTCGACAGCGGCGAAGGCGATGAGACGCTCGGCGAACGACGAGCGCTCGTCCGAG 111224 Query 24312 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTA 24371 ||||| ||||||| ||||||||||| || | || || || ||||| || || || Sbjct 111223 ATCCAGCGAAGAGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTCTCGATGGCCTTG 111164 Query 24372 AAGAGATAGTT 24382 ||||| ||||| Sbjct 111163 AAGAGGTAGTT 111153 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593717206460160