Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20cutaneum_20[genbank_20GCA_5F001636075.1_202016 -05-02] 592 sequences; 38,696,417 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq305 136 5e-27 seq116 136 5e-27 seq403 86.0 8e-12 >seq305 Length=41136 Score = 136 bits (150), Expect = 5e-27 Identities = 182/251 (73%), Gaps = 3/251 (1%) Strand=Plus/Minus Query 33582 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGT 33641 || ||||| ||| ||| ||||||||||| | || | ||||| || || ||||| Sbjct 41039 CAGGCGAAGTCGGTGTGGAGACCCTCGTCACGCGAGATGAGCTCGTTGGAGAAGGTGAGG 40980 Query 33642 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAG 33701 |||||||| ||||||||||| || ||||| || ||||| ||||| || || || |||||| Sbjct 40979 CCGGGCATAAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCGAACGAGCCAGAGAAGAAG 40920 Query 33702 ATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCC--ATAACCGGCGCT-GTCATGT 33758 || || || || || || |||||||| || | ||| | | || ||||| ||| Sbjct 40919 ATACCCTCAACGGCGGCGAAGGCAATCAGACGCTCAGCGAACGACGAGCGCTCGTCCGAG 40860 Query 33759 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 33818 ||||| ||||||| || |||||||| || | || || || || || ||||| || Sbjct 40859 ATCCAGCGAAGAGCCCAGTCAGCCTTCTTCTTGATGCAGGGGATGGTCTCGATGGCCTTG 40800 Query 33819 AAGAGATAGTT 33829 ||||| ||||| Sbjct 40799 AAGAGGTAGTT 40789 >seq116 Length=111500 Score = 136 bits (150), Expect = 5e-27 Identities = 182/251 (73%), Gaps = 3/251 (1%) Strand=Plus/Minus Query 33582 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGT 33641 || || || ||| ||| ||||||||||| | || | ||||| || || ||||| Sbjct 111403 CAGGCAAAGTCGGTGTGGAGACCCTCGTCACGCGAGATGAGCTCGTTGGAGAAGGTGAGG 111344 Query 33642 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAG 33701 |||||||| ||||||||||| || ||||| || ||||| ||||| ||||| || |||||| Sbjct 111343 CCGGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGATCCAGAGAAGAAG 111284 Query 33702 ATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCC--ATAACCGGCGCT-GTCATGT 33758 || || || || || || ||||| || || | ||| | | || ||||| ||| Sbjct 111283 ATACCCTCGACAGCGGCGAAGGCGATGAGACGCTCGGCGAACGACGAGCGCTCGTCCGAG 111224 Query 33759 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 33818 ||||| ||||||| ||||||||||| || | || || || || || ||||| || Sbjct 111223 ATCCAGCGAAGAGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTCTCGATGGCCTTG 111164 Query 33819 AAGAGATAGTT 33829 ||||| ||||| Sbjct 111163 AAGAGGTAGTT 111153 >seq403 Length=22752 Score = 86.0 bits (94), Expect = 8e-12 Identities = 147/213 (69%), Gaps = 14/213 (7%) Strand=Plus/Plus Query 33582 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGT 33641 || ||||| ||| ||||| |||||||| | || | ||||| || || ||||| Sbjct 10725 CAGGCGAAGTCGGTGTGCATGCCCTCGTCGCGCGAGATGAGCTCGTTGGAGAAGGTGAGG 10784 Query 33642 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAG 33701 ||| |||| || |||||||| || ||||| || |||| |||||||| || || |||||| Sbjct 10785 CCGCGCATCAGACCACGCTTCTTGAGCCAGAAGATGGCCGCGAATGAGCCCGAGAAGAAG 10844 Query 33702 ATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTC-------CATAACCGGCGCTGTC 33754 || || || || |||||||| || || | | | |||| | || ||| Sbjct 10845 ATGCCCTCAACACACGCAAAGGCGATCAGACGCGTGCGGAAGGGCATATCTGG---TGTG 10901 Query 33755 ATGTATCCACTTTTGAGCCCAATCGGCCTTCTT 33787 ||||| ||| | ||||| ||||||||||| Sbjct 10902 ATGTA----CTTGAGCGCCCAGTCGGCCTTCTT 10930 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629812939349760