Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20cutaneum_20[genbank_20GCA_5F001636075.1_202016 -05-02] 592 sequences; 38,696,417 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq108 143 2e-29 seq49 109 5e-19 >seq108 Length=115449 Score = 143 bits (158), Expect = 2e-29 Identities = 249/357 (70%), Gaps = 4/357 (1%) Strand=Plus/Plus Query 21168 GGGTTCCACGCGCACATAACGATGCGCCGATC-GTGGGGCCGCCTGTTAATTAGATCCAC 21226 ||||||||||||| ||| | ||| || ||||| || ||| | | ||||| || | Sbjct 114954 GGGTTCCACGCGCTCATGATGATCCGGCGATCCGTCGGGTTGG-TCTTAATCTTATTAAT 115012 Query 21227 CACGTAACGCAGCTGGTCCACCCCCTGACCCTCGTAGTTGGCGTCGGCCCCCCTGTACTC 21286 ||||| || ||||||||| |||| || | || | | | ||| | || ||||| Sbjct 115013 CACGTCCGCCAACTGGTCCACGCCCTTGCCGGCATAATCGTCCTCGCACGTCCCATACTC 115072 Query 21287 CGCCCCAAAATGTCTCCACTGGAACCCGTACACCGGCCCCAGATCGCCCTCGCGGCGGTC 21346 |||||||| || | |||||||||||| ||||| ||||| ||||||||||||||||| | Sbjct 115073 TGCCCCAAAGTGGCGCCACTGGAACCCATACACTGGCCCGAGATCGCCCTCGCGGCGATG 115132 Query 21347 CCCGAAGCCCTGCGCCG-CCAAAAAGGCGCGGGACCCGTGCGCGTCCCAAATTTTTACGC 21405 ||| ||||| ||| | | | || ||||| ||| | ||||||| || | |||| Sbjct 115133 CCC-CAGCCCCACGCGGTCGAGGAACTCGCGGCTCCCATTGCCGTCCCAGATATGCACGC 115191 Query 21406 CGCGGCGCGACAGTTCGGTGGAGTCGGTGGAGCCCCTGATAAACCACAGCAACTCCTCCA 21465 | | ||| | || ||||||| |||| || ||||| || | |||||| | Sbjct 115192 CCTTCTCCTGCAGGATGCGGGCGTCGGTGTGGCCCGCGACGAACCAGAGGAGCTCCTCGA 115251 Query 21466 CGACGCCCCTCCAAAACACCCTTTTGGTGGTTAACAGAGGAAACTCGTCCCTGAGGT 21522 ||||||| | ||| || |||| |||||||||| || || || || | |||||| Sbjct 115252 CGACGCCGCGCCAGAAGACCCGCTTGGTGGTTAGGAGGGGGAAGCCGCGCGTGAGGT 115308 >seq49 Length=172312 Score = 109 bits (120), Expect = 5e-19 Identities = 226/331 (68%), Gaps = 4/331 (1%) Strand=Plus/Minus Query 21168 GGGTTCCACGCGCACATAACGATGCGCCGATC-GTGGGGCCGCCTGTTAATTAGATCCAC 21226 ||||||||||||| ||| | || |||| ||| |||||| | | ||||| | | Sbjct 55630 GGGTTCCACGCGCTCATGATAATCCGCCTATCTGTGGGGTTGG-TCTTAATCTTGTTGAT 55572 Query 21227 CACGTAACGCAGCTGGTCCACCCCCTGACCCTCGTAGTTGGCGTCGGCCCCCCTGTACTC 21286 ||||| |||||||||||| |||| || | |||| | | ||| | || ||||| Sbjct 55571 CACGTCGGCCAGCTGGTCCACGCCCTTGCCGGCATAGTCGTCCTCGCACGTCCCATACTC 55512 Query 21287 CGCCCCAAAATGTCTCCACTGGAACCCGTACACCGGCCCCAGATCGCCCTCGCGGCGGTC 21346 || ||||| || | |||||||||||| ||||||||||| |||||||||||||| || | Sbjct 55511 GGCGCCAAAGTGGCGCCACTGGAACCCATACACCGGCCCGAGATCGCCCTCGCGCCGATG 55452 Query 21347 CCCGAAGCCCTGCGCCG-CCAAAAAGGCGCGGGACCCGTGCGCGTCCCAAATTTTTACGC 21405 ||| || || ||| | | | || ||||| ||| | ||||||| || | |||| Sbjct 55451 CCC-CAGGCCGACGCGGTCGAGGAACTCGCGGCTCCCATTGCCGTCCCAGATATGCACGC 55393 Query 21406 CGCGGCGCGACAGTTCGGTGGAGTCGGTGGAGCCCCTGATAAACCACAGCAACTCCTCCA 21465 | | || | || ||||||| || || ||||| || | |||||| | Sbjct 55392 CCTTCTCCTGGAGGAGGCGGGCGTCGGTGTGCCCGGCGACGAACCAGAGGAGCTCCTCGA 55333 Query 21466 CGACGCCCCTCCAAAACACCCTTTTGGTGGT 21496 ||||||| | ||| || || | || ||||| Sbjct 55332 CGACGCCGCGCCAGAAGACGCGCTTAGTGGT 55302 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427772913596160