Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20cutaneum_20[genbank_20GCA_5F001636075.1_202016 -05-02] 592 sequences; 38,696,417 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq26 87.8 2e-12 >seq26 Length=207845 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 ||||| || | ||| | ||| | ||||| || ||||| || || ||||| || ||| Sbjct 45476 CCGCCACGAAGACGGAGAACGAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAG 45417 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| || |||||||| || || || |||| || || ||||| ||||| || Sbjct 45416 AGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCGGGGGGA 45357 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 ||||| || ||||| ||| || || | | || | ||||| | | ||| ||| Sbjct 45356 ATGCCCTCCTTGTCCTGGATCTTCGACTTAACGTTGTCGATAGTGTCCGACGACTCGACC 45297 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 || | ||| | ||||||||||| | || || ||||| || |||||| Sbjct 45296 TCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATA 45249 Score = 84.2 bits (92), Expect = 2e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669 || |||||||| || || ||| |||| ||||| ||||| |||||||| ||||| || ||| Sbjct 45860 TCCTCGAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTG 45801 Query 139670 TCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACC 139729 || ||| || || | | || | ||||||| | ||| ||||| | || | Sbjct 45800 TCCTGGATCTTGCTCTTCACGTTGTCGATGGTGTCGGACGACTCGACCTCGAGAGTAATG 45741 Query 139730 GTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 ||||||||||| | || || ||||| || |||||| Sbjct 45740 GTCTTGCCGGTAAGAGTCTTGACGAAGATCTGCATA 45705 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496060329126400