Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20cutaneum_20[genbank_20GCA_5F001636075.1_202016 -05-02] 592 sequences; 38,696,417 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq305 145 1e-29 seq116 140 5e-28 seq403 95.1 2e-14 >seq305 Length=41136 Score = 145 bits (160), Expect = 1e-29 Identities = 184/251 (73%), Gaps = 3/251 (1%) Strand=Plus/Minus Query 49960 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 50019 || ||||| ||| ||| ||||||||||| | || || |||||||| || ||||| Sbjct 41039 CAGGCGAAGTCGGTGTGGAGACCCTCGTCACGCGAGATGAGCTCGTTGGAGAAGGTGAGG 40980 Query 50020 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAG 50079 |||||||| ||||||||||| || ||||| || ||||| || || || ||||| |||||| Sbjct 40979 CCGGGCATAAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCGAACGAGCCAGAGAAGAAG 40920 Query 50080 ATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCC--ATAACTGGCGCT-GTCATGT 50136 || || || || ||||| ||||||| || | ||| | | || ||||| ||| Sbjct 40919 ATACCCTCAACGGCGGCGAAGGCAATCAGACGCTCAGCGAACGACGAGCGCTCGTCCGAG 40860 Query 50137 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 50196 ||||| ||||||| || |||||||| || | || || || || || ||||| || Sbjct 40859 ATCCAGCGAAGAGCCCAGTCAGCCTTCTTCTTGATGCAGGGGATGGTCTCGATGGCCTTG 40800 Query 50197 AAGAGATAGTT 50207 ||||| ||||| Sbjct 40799 AAGAGGTAGTT 40789 >seq116 Length=111500 Score = 140 bits (154), Expect = 5e-28 Identities = 183/251 (73%), Gaps = 3/251 (1%) Strand=Plus/Minus Query 49960 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 50019 || || || ||| ||| ||||||||||| | || || |||||||| || ||||| Sbjct 111403 CAGGCAAAGTCGGTGTGGAGACCCTCGTCACGCGAGATGAGCTCGTTGGAGAAGGTGAGG 111344 Query 50020 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAG 50079 |||||||| ||||||||||| || ||||| || ||||| || || || ||||| |||||| Sbjct 111343 CCGGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGATCCAGAGAAGAAG 111284 Query 50080 ATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCC--ATAACTGGCGCT-GTCATGT 50136 || || || || ||||| ||||| | || | ||| | | || ||||| ||| Sbjct 111283 ATACCCTCGACAGCGGCGAAGGCGATGAGACGCTCGGCGAACGACGAGCGCTCGTCCGAG 111224 Query 50137 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 50196 ||||| ||||||| ||||||||||| || | || || || || || ||||| || Sbjct 111223 ATCCAGCGAAGAGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTCTCGATGGCCTTG 111164 Query 50197 AAGAGATAGTT 50207 ||||| ||||| Sbjct 111163 AAGAGGTAGTT 111153 >seq403 Length=22752 Score = 95.1 bits (104), Expect = 2e-14 Identities = 149/213 (70%), Gaps = 14/213 (7%) Strand=Plus/Plus Query 49960 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 50019 || ||||| ||| ||||| |||||||| | || || |||||||| || ||||| Sbjct 10725 CAGGCGAAGTCGGTGTGCATGCCCTCGTCGCGCGAGATGAGCTCGTTGGAGAAGGTGAGG 10784 Query 50020 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAG 50079 ||| |||| || |||||||| || ||||| || |||| ||| ||||| || || |||||| Sbjct 10785 CCGCGCATCAGACCACGCTTCTTGAGCCAGAAGATGGCCGCGAATGAGCCCGAGAAGAAG 10844 Query 50080 ATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTC-------CATAACTGGCGCTGTC 50132 || || || || |||||||| | || | | | |||| |||| ||| Sbjct 10845 ATGCCCTCAACACACGCAAAGGCGATCAGACGCGTGCGGAAGGGCATATCTGG---TGTG 10901 Query 50133 ATGTATCCACTTTTGAGCCCAATCGGCCTTCTT 50165 ||||| ||| | ||||| ||||||||||| Sbjct 10902 ATGTA----CTTGAGCGCCCAGTCGGCCTTCTT 10930 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718263484810880