Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20cutaneum_20[genbank_20GCA_5F001636075.1_202016 -05-02] 592 sequences; 38,696,417 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq80 140 3e-28 seq131 105 6e-18 >seq80 Length=141804 Score = 140 bits (154), Expect = 3e-28 Identities = 222/313 (71%), Gaps = 4/313 (1%) Strand=Plus/Minus Query 5584 CTCGCAGATCAGCTGCGCTATTCGGTCGCCCGTCTTTACCTCGAAATCGTTGTGGCCGAA 5643 |||| ||| |||||||| || ||||||||| | || |||| ||| || ||| | Sbjct 94363 CTCGAGGATGAGCTGCGCGATGCGGTCGCCCTTGGACACGGCGAAGTCGGCGTCGCCATA 94304 Query 5644 GTTGAACAGCACCACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGCGCCCAC 5703 ||||||||| | ||| || | |||||||||||||||||| ||||||||||||||| Sbjct 94303 GTTGAACAGGAGCACCTTGACCTCGCCGCGGTAGTCGGCGTCGATCACGCCCGCGCCCGT 94244 Query 5704 GTCGATGAAGTGCTTGACCGCCAGGCCGGAGCGGGGAGCCACGCGGCCGTA-GCACCCAT 5762 |||||| ||||||| |||||||||||||||| || || | ||| ||||| | || | Sbjct 94243 GTCGATCGAGTGCTTCGCCGCCAGGCCGGAGCGCGGCGCGATGCGCCCGTACGTGCCGAC 94184 Query 5763 CGGGAAGCTGTATCTGCAGGTCCGTGAACACCACTCGCCGACCGCCCGCAGGGACGATGC 5822 |||| | | ||| | | |||| | || | | |||| |||||| ||| || Sbjct 94183 GGGGACGGCGATGCTG-ATGCCCGTCGAGACGAGGGCCTTGCCGCGCGCAGGCACGCTGA 94125 Query 5823 AGT-CGCAAGCGCTGCAGAGGTCGTACCCGGCCGCCCGCGGGGACCCCCTGGTGGGGAGC 5881 || ||| ||| | | | ||||| ||||||| | | | || || | || ||| ||| Sbjct 94124 TGTCCGCCGACGC-GTACAAGTCGTGGCCGGCCGACAGGGACGAGCCGCGGGAGGGCAGC 94066 Query 5882 GTGGCGTTGGGGG 5894 || |||| ||||| Sbjct 94065 GTCGCGTCGGGGG 94053 >seq131 Length=100853 Score = 105 bits (116), Expect = 6e-18 Identities = 126/171 (74%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 5584 CTCGCAGATCAGCTGCGCTATTCGGTCGCCCGTCTTTACCTCGAAATCGTTGTGGCCGAA 5643 |||| ||| |||||||| || ||||||||| | || | || || || ||| | Sbjct 53747 CTCGAGGATGAGCTGCGCGATACGGTCGCCCTTAGCCACGGCAAAGTCCGAGTCGCCATA 53688 Query 5644 GTTGAACAGCACCACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGCGCCCAC 5703 ||||||||| | ||| || | |||||||||||||||||| || ||||| |||||| Sbjct 53687 GTTGAACAGGAGCACCTTGACTTCGCCGCGGTAGTCGGCGTCGATGACGCCGGCGCCCGT 53628 Query 5704 GTCGATGAAGTGCTTGACCGCCAGGCCGGAGCGGGGAGCCACGCGGCCGTA 5754 |||||| ||||||| |||| || || ||||| ||||| | || ||||| Sbjct 53627 GTCGATCGAGTGCTTCGCCGCGAGACCCGAGCGAGGAGCGATACGCCCGTA 53577 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430051297157504