Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20cutaneum_20[genbank_20GCA_5F001636075.1_202016 -05-02] 592 sequences; 38,696,417 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq26 118 9e-22 >seq26 Length=207845 Score = 118 bits (130), Expect = 9e-22 Identities = 145/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || ||| | ||||| || || |||| || || || ||| || || Sbjct 45478 ATGCAGATCTTCGTCAAGACTCTCACCGGCAAGACCATCACCCTCGAGGTTGAATCCTCC 45537 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || | || || ||||| ||||||||||| ||||| ||||| || Sbjct 45538 GACACTATCGACAATGTGAAGTCGAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCAG 45597 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||| | || || |||||||| ||| | ||||| ||| ||| | ||||| |||||| Sbjct 45598 CAGCGTTTGATCTTCGCCGGCAAGCAGCTTGAGGACGGCCGTACCCTTTCCGACTACAAC 45657 Query 22399 ATTCAAAAAGAATCCACC 22416 || || || || |||||| Sbjct 45658 ATCCAGAAGGAGTCCACC 45675 Score = 109 bits (120), Expect = 5e-19 Identities = 143/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || ||| | ||||| || || | ||||| || || || | || Sbjct 45706 ATGCAGATCTTCGTCAAGACTCTTACCGGCAAGACCATTACTCTCGAGGTCGAGTCGTCC 45765 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | | || || || || ||||||||||| || || ||||| || Sbjct 45766 GACACCATCGACAACGTGAAGAGCAAGATCCAGGACAAGGAGGGCATCCCTCCCGACCAG 45825 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || ||||||||||| ||| | |||||| ||||||| | || || |||||| Sbjct 45826 CAGCGTCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTTTCGGACTACAAC 45885 Query 22399 ATTCAAAAAGAATCCACC 22416 || || || || || ||| Sbjct 45886 ATCCAGAAGGAGTCGACC 45903 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | ||||| || || |||| || || || || | | Sbjct 45250 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTCGAGTCGTCG 45309 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | | || || || || ||||||||||| ||||| ||||| || Sbjct 45310 GACACTATCGACAACGTTAAGTCGAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAG 45369 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || ||||| || |||||||| ||| | |||||| |||||| ||||||| |||||| Sbjct 45370 CAGCGCCTTATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACTCTCTCCGACTACAAC 45429 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || || ||||| Sbjct 45430 ATCCAGAAGGAGTCCAC 45446 Score = 93.3 bits (102), Expect = 4e-14 Identities = 113/154 (73%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 ||||| || || |||| ||||| || || || | || ||| | ||| | |||| Sbjct 44999 ACCGGCAAGACCATCACCCTTGAGGTCGAGTCCTCGGACACCATCGACAACGTCAAGTCG 45058 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 ||||| || |||||||||||||| || ||||| || || |||||||| || || ||||| Sbjct 45059 AAAATCCAGGACAAGGAGGGTATCCCTCCCGACCAGCAGCGTCTTATCTTCGCGGGCAAG 45118 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396 ||| | ||||| |||||| |||| || |||| Sbjct 45119 CAGCTCGAGGACGGCCGCACTCTCTCGGACTACA 45152 Score = 87.8 bits (96), Expect = 2e-12 Identities = 123/173 (71%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 ||||| || ||| ||||||| || || || | | || ||| | ||| | |||| Sbjct 46006 ACCGGCAAGACGATCACTCTCGAGGTCGAGTCGTCGGACACCATCGACAACGTCAAGTCG 46065 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || ||||||||||||||||| ||||| || || ||||| || || || || || Sbjct 46066 AAGATCCAGGACAAGGAGGGTATTCCTCCCGACCAGCAGCGTCTCATCTTCGCGGGAAAG 46125 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415 ||| | ||||| ||||| | || || |||||||| || || || || || Sbjct 46126 CAGCTCGAGGACGGTCGCACGCTTTCGGACTACAACATCCAGAAGGAGTCTAC 46178 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419724971662480