Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20cutaneum_20[genbank_20GCA_5F001636075.1_202016 -05-02] 592 sequences; 38,696,417 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq26 141 2e-28 >seq26 Length=207845 Score = 141 bits (156), Expect = 2e-28 Identities = 170/230 (74%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || ||||| |||| ||| || || ||||| || ||||||| Sbjct 45704 CCACCACGGAGGCGGAGCACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAA 45645 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || ||||| || | || || || |||||||||| |||||| || || ||| Sbjct 45644 AGGGTACGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGG---TCGGGG 45588 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || || || || ||||| || |||| ||||| || || |||| ||| ||||| Sbjct 45587 GGAATGCCCTCCTTGTCCTGAATCTTCGACTTCACATTGTCGATAGTGTCGGAGGATTCA 45528 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| ||||| ||||| ||||| |||||||||||||| |||||||| Sbjct 45527 ACCTCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 45478 Score = 127 bits (140), Expect = 5e-24 Identities = 158/215 (73%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 288262 AGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCT 288321 || ||||| |||| ||| || || ||||| || ||||||| ||| ||||| || || Sbjct 45461 AGAACGAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCATCC 45402 Query 288322 TCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTA 288378 || | || || || |||||||| || ||||| || || ||| || || || || Sbjct 45401 TCGAGCTGCTTGCCGGCGAAGATAAGGCGCTGCTGG---TCGGGGGGAATGCCCTCCTTG 45345 Query 288379 TCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATC 288438 |||||||| |||| || ||||| || |||| || ||| || || ||||| ||||| Sbjct 45344 TCCTGGATCTTCGACTTAACGTTGTCGATAGTGTCCGACGACTCGACCTCGAGGGTGATG 45285 Query 288439 GTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| || ||||||||||| |||||||| Sbjct 45284 GTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 45250 Score = 116 bits (128), Expect = 9e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | ||| || || || | || || || ||||| || ||||| | Sbjct 45932 CCACCACGCAGACGAAGGACAAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAA 45873 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || || | || || || || ||||| |||||||| || ||| Sbjct 45872 AGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCGGGAGGG 45813 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 || || || || |||||||| || ||| |||||||| || || | ||| ||| || || Sbjct 45812 ATGCCCTCCTTGTCCTGGATCTT-GCTCTTCACGTTGTCGATGGTGTCGGACGACTCGAC 45754 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| || || ||||| ||||| |||||||||||||| |||||||| Sbjct 45753 CTCGAGAGTAATGGTCTTGCCGGTAAGAGTCTTGACGAAGATCTGCAT 45706 Score = 102 bits (112), Expect = 2e-16 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303 || ||||| || || | || || || || | ||| || || ||||| || ||||| Sbjct 46211 TGGCCACCACGAAGACGGAGGACCAGGTGGAGCGTAGACTCCTTCTGGATGTTGTAGTCC 46152 Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363 | |||||||| ||||| || | || ||||| |||||||| |||||||| || Sbjct 46151 GAAAGCGTGCGACCGTCCTCGAGCTGCTTTCCCGCGAAGATGAGACGCTGCTGGTCGGGA 46092 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || || || || || |||||||| |||| || ||||| || || | || ||| || Sbjct 46091 GGAATACCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTGTCCGACGACTCG 46032 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAG 288452 || ||||| ||||||||||| ||||| || Sbjct 46031 ACCTCGAGAGTGATCGTCTTGCCGGTGAG 46003 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179645452321376