Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20cutaneum_20[genbank_20GCA_5F001636075.1_202016 -05-02] 592 sequences; 38,696,417 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq403 95.1 3e-14 seq300 89.7 1e-12 >seq403 Length=22752 Score = 95.1 bits (104), Expect = 3e-14 Identities = 100/132 (76%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 243585 CATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAGAA 243644 |||| | |||||||| ||||| || |||||||| | || ||||||| || || ||||| Sbjct 10553 CATGTGCCAGTACATGGAATTTGTGGCCGACCGGCTCGTCGTCGCGCTCGGCTACGAGAA 10494 Query 243645 AGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAAAC 243704 ||||| | ||| ||||| || | || ||||||||||| ||||| || || || | Sbjct 10493 GCTGTACCATGCCACCAACCCGTTCGACTGGATGGAGCTCATCTCGCTGCAGGGCAAGGC 10434 Query 243705 TAACTTCTTCGA 243716 ||||||||||| Sbjct 10433 CAACTTCTTCGA 10422 >seq300 Length=41695 Score = 89.7 bits (98), Expect = 1e-12 Identities = 99/132 (75%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 243585 CATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAGAA 243644 |||| | |||||||| |||||||| || |||||| | || |||| || || || ||||| Sbjct 35190 CATGTGCCAGTACATGGAATTCGTGGCGGACCGCCTCGTCGTCGCACTCGGGTACGAGAA 35249 Query 243645 AGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAAAC 243704 ||||| || | | ||||| || | || ||||||||||| ||||| || || || | Sbjct 35250 GCTGTACCACGCAACCAACCCGTTCGACTGGATGGAGCTCATCTCGCTCCAGGGCAAGGC 35309 Query 243705 TAACTTCTTCGA 243716 ||||| ||||| Sbjct 35310 CAACTTTTTCGA 35321 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102871634655200