Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20cutaneum_20[genbank_20GCA_5F001636075.1_202016 -05-02] 592 sequences; 38,696,417 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq77 114 4e-20 seq39 105 2e-17 seq70 104 7e-17 seq305 96.9 1e-14 seq331 89.7 2e-12 >seq77 Length=142565 Score = 114 bits (126), Expect = 4e-20 Identities = 189/273 (69%), Gaps = 0/273 (0%) Strand=Plus/Minus Query 302571 GTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGC 302630 ||| |||||| ||||| | ||||||||| || |||||||| | || || || || Sbjct 18150 GTCCTCCATAGCCTTGACGAGACGACGCTGGATGTAACCAGTCTCGGCAGTCTTGACGGC 18091 Query 302631 TGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAG 302690 || ||||| ||||| ||||||||||||| || |||||||| | ||| | || || Sbjct 18090 CGTGTCAATGAGACCCTCACGACCACCCATGGCGTGGAAGAAGAACTCCTGAGGAGTAAG 18031 Query 302691 CCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGT 302750 || | || | ||| |||| ||||| ||||||| ||| || | |||| ||| | Sbjct 18030 ACCACGAAGGTACGAGTTCTCGACGAAGCCACGCGACTCTGGTCCGTAGTCGTCCTTTGA 17971 Query 302751 AAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTG 302810 ||||| || || || | || ||||| | || |||||||| || || || |||| Sbjct 17970 GAAGTGGGGAAGAGTACGGTGACGGAAGCCGAACGGAATACGCTTGCCTTCGACAATCTG 17911 Query 302811 CTGTCCCAGGCACGAAATCATCTGCGAAATATT 302843 || || | || | | ||||||||| ||||| Sbjct 17910 TTGACCGACACAAGCAGACATCTGCGAGATATT 17878 >seq39 Length=190909 Score = 105 bits (116), Expect = 2e-17 Identities = 180/259 (69%), Gaps = 4/259 (2%) Strand=Plus/Plus Query 251403 GGCGATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAG 251462 ||| || ||||| |||| | ||||| || | || | | || || || | || || | Sbjct 96258 GGCCATGAGACCGCACTGGTCGCACACGTGCAGGCGGAAGGCGTCGGACGACTCGTACAT 96317 Query 251463 CCGACCCTTGGTGAAGC--GAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCA 251520 || ||||| ||| | | ||| |||||| || |||||||| || |||||||||||| Sbjct 96318 GCGCTCCTTGAGGAAACCGGCGAT--ACCGTGCGAGATCATACAGTCGCGCTCCATTTCA 96375 Query 251521 CCGAAACGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACC 251580 |||||||| |||||||| || || | | ||||||| ||||||| || ||||| | | Sbjct 96376 CCGAAACGCAGACCACCGTCACGCGAACGACCCTCGACAGGCTGGCGCGTGAGGATCTGC 96435 Query 251581 ATAGGACCGATGGAGCGGCTATGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAG 251640 | ||| || || || || ||| || | ||||| ||||| || ||||||||| Sbjct 96436 AGAGGGCCACGGGCACGAGCGTGGATCTTGTCGTCCACCATGTGCTTCAGGCGCTGGTAG 96495 Query 251641 AATGCGGGACCGATGAAGA 251659 | | || |||| | ||| Sbjct 96496 TAGGTTGGGCCGAAGTAGA 96514 >seq70 Length=146382 Score = 104 bits (114), Expect = 7e-17 Identities = 125/170 (74%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 251404 GCGATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGC 251463 || || |||||||| | | |||||| || | | | | ||||| || | || || | Sbjct 54059 GCCATGAGACCACATTGGTCACACACGTGAAGACGGAACGCATCCGACGACTCGTACATG 54118 Query 251464 CGACCCTTGGTGAAGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCG 251523 || ||||| ||| | || |||||| || |||||||| || ||||||||||||||| Sbjct 54119 CGCTCCTTGAGGAAACCAGCGATACCGTGCGAGATCATACAGTCGCGCTCCATTTCACCG 54178 Query 251524 AAACGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGTGAG 251573 ||||| |||||||| || || | | ||||||| | |||||||| ||||| Sbjct 54179 AAACGCAGACCACCGTCACGCGAACGACCCTCGACGGGCTGACGGGTGAG 54228 Score = 84.2 bits (92), Expect = 6e-11 Identities = 114/156 (73%), Gaps = 6/156 (4%) Strand=Plus/Plus Query 251835 CAGTTGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTT 251894 ||| || |||||||||||||| |||||| || || || |||||||||| ||| || Sbjct 54490 CAGGTGCCCGATAGTCATACGAGAGGGAATGGCGTGCGGGTTGATGATGAGGTCCGGCAC 54549 Query 251895 CAGTCCATCAGCAGTGAAGGGCATATCCTTTTCCT--CAATA-ATGTTTCCAATAGTTCC 251951 | || || |||||||| ||||| ||| |||| | || || | ||||| || || Sbjct 54550 GATACCCTCGGCAGTGAACGGCATGTCC---TCCTGGCGGTAGGTGATACCAATGGTACC 54606 Query 251952 CTTTTGTCCGTGACGAGAACTGAACTTATCACCAAT 251987 ||| || |||||||| || |||||| ||||| || Sbjct 54607 CTTCTGACCGTGACGCGAGGCGAACTTGTCACCGAT 54642 >seq305 Length=41136 Score = 96.9 bits (106), Expect = 1e-14 Identities = 247/371 (67%), Gaps = 4/371 (1%) Strand=Plus/Plus Query 133289 GGAGAAGTTCAACTGGCCGAAGCCCGTGCCTTTTATGGGCTACAGATTGCGATGGAAAAT 133348 ||||| || || | ||||| ||| |||| || || | ||||| |||||| || Sbjct 40669 GGAGAGGTCCAGATCGCCGAGGCCAAGACCTTCTACGGCTTCCAGATCATGATGGAGAAC 40728 Query 133349 ATCCATTCTATCACATATTCTACTCTAATTGATACTTACATCAAAGATACCGTCCAGAAG 133408 ||||| || || || || || || || || |||||| || || || | | Sbjct 40729 ATCCACTCCGAGACCTACTCGCTCCTCATCGACACCTACATCCGCGACGGCGCCC-GCCG 40787 Query 133409 CA-CAAACTATTCAACGCCATTAGCGAATTTCCT-TGTATTAAAAAGAAATCTGACTGGG 133466 || | | || ||||| ||||| | || ||| || || || ||||| ||||||||| Sbjct 40788 CAACTACCTCTTCAAGGCCATC-GAGACCATCCCCTGCATCAAGAAGAAGGCTGACTGGG 40846 Query 133467 CTATTAAATGGATCCAGGACAAGCGTGCGAGTTTTGCTACTCGTCTCGTTGCTTTTGCTG 133526 || || |||||| |||| |||| || || ||| ||||| |||| || || | Sbjct 40847 CTCTTCGCTGGATCTCGGACGAGCGCTCGTCGTTCGCTGAGCGTCTGATTGCCTTCGCCG 40906 Query 133527 TAGTAGAGGGCAtttttttCAGTGGTGCGTTCTGCTCTATTTTTTGGCTTAAAAAGCGTG 133586 || ||||| || || ||| ||| ||||| ||| || || ||||| || ||||||| Sbjct 40907 CCGTTGAGGGTATCTTCTTCTCTGGCTCGTTCGCCTCCATCTTCTGGCTCAAGAAGCGTG 40966 Query 133587 GTATTCTACCTGGACTGTGTTTTTCTAACGAACTTATTTCAAGGGACGAGGCACTTCACA 133646 | || | || || || || || ||||| || || || | ||||||| || |||| Sbjct 40967 GCCTTATGCCCGGCCTCACCTTCTCCAACGAGCTCATCTCGCGTGACGAGGGTCTCCACA 41026 Query 133647 CCGAATTTGCC 133657 |||| || ||| Sbjct 41027 CCGACTTCGCC 41037 >seq331 Length=35712 Score = 89.7 bits (98), Expect = 2e-12 Identities = 237/360 (66%), Gaps = 4/360 (1%) Strand=Plus/Minus Query 59988 AACCAGTACCAATACCCTTTGTTCCATTGATAAGAATCATCGGGATAATTGGGATATAAT 60047 |||| ||||||||||| | | || ||||| ||||||||||| | | | || | || | Sbjct 29495 AACCGGTACCAATACCGTCCGCACCGTTGATGAGAATCATCGGAACAGTCGGCAAGTAGT 29436 Query 60048 AAACTGGCTCAACACTATCACCATCATCTTTTAAGTATGTTAAAACCTTGTCGTCAATTT 60107 | | ||||| | || | || || || | ||| || | || |||||| | Sbjct 29435 ACTCGGGCTCGATACGCTGGCCGTCCTCAACAAGGTAGGTAAGAAGTGGGTCGTCCGCTG 29376 Query 60108 CGGGAAATATAGCCCGAGTAATCTTGGATAATTGTGTGAAAATATACCTCTCGGATGCTG 60167 | | || | ||| || || ||| ||| | |||||||| || | || || | Sbjct 29375 GGTGGAACACAGCGCGGGTCATCGCGGAGGTGTTGGTGAAAATGTAACGAGCGCTGGCAG 29316 Query 60168 CGTCCTTGCCACCCATAAGACGGGTTCCAAATTGTCCGTTTGGCTGGAATAGATTAATGT 60227 |||||||||| ||| | ||| || || || || ||||| |||| || | || |||| Sbjct 29315 CGTCCTTGCCGCCCTGCATACGCGTACCGAACTGACCGTTGGGCTCGAGCAAGTTGATGT 29256 Query 60228 TGTTAGAGCCTACGAAATTTTGAGCGAGACCAACAATAGCACCATTTAAACTGGCTTCAC 60287 |||| ||| || || || || || |||||||| || | | | ||||| ||||| Sbjct 29255 TGTTGCTGCCAACAAACTTCTGCGCCAGACCAACGATCGTGGCCGTCAAACTCTGTTCAC 29196 Query 60288 CGTGATGATATCCAGAATGTTCT--GAAACATATCCACTGAATTGTGCGACTTTAATTTC 60345 |||| || || | | |||||| || || || |||| | |||||||| ||||| || Sbjct 29195 CGTGGTGGTAGGCCG--TGTTCTCGGACACGTAACCACCAAGCTGTGCGACCTTAATCTC 29138 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471806436263504