Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20cutaneum_20[genbank_20GCA_5F001636075.1_202016 -05-02] 592 sequences; 38,696,417 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq26 100 7e-16 >seq26 Length=207845 Score = 100 bits (110), Expect = 7e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || ||||| || || || ||||| | || || || || ||| Sbjct 45253 CAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTCGAGTCGTCGGAC 45312 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| ||||| || || || || || ||| || ||| || Sbjct 45313 ACTATCGACAACGTTAAGTCGAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAGCAG 45372 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | |||||||||||||| |||||| | || ||||| | ||| | |||| |||||| || Sbjct 45373 CGCCTTATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACTCTCTCCGACTACAACATC 45432 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 ||||| ||||| ||||||||||| ||| | | ||||| Sbjct 45433 CAGAAGGAGTCCACTCTTCACCTCGTTCTCCGTCTTCG 45470 Score = 84.2 bits (92), Expect = 5e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811 ||||| | | ||| ||||||||||| ||||| ||||||| || ||||| | | ||| Sbjct 45470 CGAAGACGGAGAACGAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTG 45411 Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 | ||||| || |||||||| |||||||||||||| || || || Sbjct 45410 CGGCCATCCTCGAGCTGCTTGCCGGCGAAGATAAGGCGCTGCTG 45367 Score = 84.2 bits (92), Expect = 5e-11 Identities = 142/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || ||||| || || || ||||| | || || ||| || ||| Sbjct 45481 CAGATCTTCGTCAAGACTCTCACCGGCAAGACCATCACCCTCGAGGTTGAATCCTCCGAC 45540 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| |||||||| || || || || ||| || ||| || Sbjct 45541 ACTATCGACAATGTGAAGTCGAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCAGCAG 45600 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | | ||||||||||| |||||| | || || || | || | |||| |||||| || Sbjct 45601 CGTTTGATCTTCGCCGGCAAGCAGCTTGAGGACGGCCGTACCCTTTCCGACTACAACATC 45660 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378 ||||| ||||| || |||||||| || Sbjct 45661 CAGAAGGAGTCCACCCTTCACCTCGT 45686 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181811835889232