Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20cutaneum_20[genbank_20GCA_5F001636075.1_202016 -05-02] 592 sequences; 38,696,417 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq305 87.8 2e-12 seq403 86.0 9e-12 seq300 86.0 9e-12 >seq305 Length=41136 Score = 87.8 bits (96), Expect = 2e-12 Identities = 107/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 39616 GCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 39675 |||||||||||| || || ||||| || | || | ||||| || || ||||| Sbjct 41040 GCAGGCGAAGTCGGTGTGGAGACCCTCGTCACGCGAGATGAGCTCGTTGGAGAAGGTGAG 40981 Query 39676 TCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAA 39735 || ||||| || |||||||| |||||||| || |||| || || || ||||| ||||| Sbjct 40980 GCCGGGCATAAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCGAACGAGCCAGAGAAGAA 40921 Query 39736 GATGCCTTCTACTGCTGCAAATGCAA 39761 ||| || || || || || || |||| Sbjct 40920 GATACCCTCAACGGCGGCGAAGGCAA 40895 >seq403 Length=22752 Score = 86.0 bits (94), Expect = 9e-12 Identities = 98/132 (74%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 39616 GCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 39675 |||||||||||| || | |||||| || | || | ||||| || || ||||| Sbjct 10724 GCAGGCGAAGTCGGTGTGCATGCCCTCGTCGCGCGAGATGAGCTCGTTGGAGAAGGTGAG 10783 Query 39676 TCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAA 39735 || |||| ||||||||||| |||||||| || ||||| || || || || || ||||| Sbjct 10784 GCCGCGCATCAGACCACGCTTCTTGAGCCAGAAGATGGCCGCGAATGAGCCCGAGAAGAA 10843 Query 39736 GATGCCTTCTAC 39747 |||||| || || Sbjct 10844 GATGCCCTCAAC 10855 >seq300 Length=41695 Score = 86.0 bits (94), Expect = 9e-12 Identities = 98/132 (74%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 39616 GCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 39675 |||||||||||| || | ||||||||| | || | |||||| || || || || Sbjct 35009 GCAGGCGAAGTCCGTGTGCATGCCCTCATCGCGGGAGATGAGTTCGTTCGAGAAGGTCAG 34950 Query 39676 TCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAA 39735 || |||| || || ||||| |||||||| || ||||| ||||| || || || ||||| Sbjct 34949 GCCTCGCATCAGGCCTCGCTTCTTGAGCCAGAAAATGGCCGCAAAGGAGCCCGAGAAGAA 34890 Query 39736 GATGCCTTCTAC 39747 |||||| || || Sbjct 34889 GATGCCCTCCAC 34878 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686903716874880