Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20cutaneum_20[genbank_20GCA_5F001636075.1_202016 -05-02] 592 sequences; 38,696,417 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq305 100 4e-16 seq116 100 4e-16 >seq305 Length=41136 Score = 100 bits (110), Expect = 4e-16 Identities = 149/209 (71%), Gaps = 3/209 (1%) Strand=Plus/Minus Query 48183 TCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCG 48242 ||||| || || ||||| |||||||| || ||||| || |||||||| || || | ||| Sbjct 40997 TCGTTGGAGAAGGTGAGGCCGGGCATAAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCG 40938 Query 48243 AAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTA- 48301 || || ||||| ||||| || || || ||||| || || || | || | ||| || | Sbjct 40937 AACGAGCCAGAGAAGAAGATACCCTCAACGGCGGCGAAGGCAATCAGACGCTCAGCGAAC 40878 Query 48302 -ACTGGCT-TCGTTGTGTATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGC 48359 || || |||| ||||| || | ||||| |||||||||||||| | || || Sbjct 40877 GACGAGCGCTCGTCCGAGATCCAGCGAAGAGCCCAGTCAGCCTTCTTCTTGATGCAGGGG 40818 Query 48360 ATTGTTTCTATAGCATTAAAGAGAAAGTT 48388 || || || || || || ||||| |||| Sbjct 40817 ATGGTCTCGATGGCCTTGAAGAGGTAGTT 40789 >seq116 Length=111500 Score = 100 bits (110), Expect = 4e-16 Identities = 149/209 (71%), Gaps = 3/209 (1%) Strand=Plus/Minus Query 48183 TCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCG 48242 ||||| || || ||||| |||||||| || ||||| || |||||||| || || | ||| Sbjct 111361 TCGTTGGAGAAGGTGAGGCCGGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCG 111302 Query 48243 AAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTA- 48301 || |||||||| ||||| || || || || || || || ||| | || | ||| || | Sbjct 111301 AAGGATCCAGAGAAGAAGATACCCTCGACAGCGGCGAAGGCGATGAGACGCTCGGCGAAC 111242 Query 48302 -ACTGGCT-TCGTTGTGTATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGC 48359 || || |||| ||||| || | ||||| || ||||||||||| | || || Sbjct 111241 GACGAGCGCTCGTCCGAGATCCAGCGAAGAGCCCAGTCGGCCTTCTTCTTGATGCAGGGG 111182 Query 48360 ATTGTTTCTATAGCATTAAAGAGAAAGTT 48388 || || || || || || ||||| |||| Sbjct 111181 ATGGTCTCGATGGCCTTGAAGAGGTAGTT 111153 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694663659450880