Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20guehoae_20[genbank_20GCA_5F001600415.1_202016- 03-01] 35 sequences; 33,698,914 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq4 95.1 3e-14 seq18 89.7 1e-12 >seq4 Length=2444010 Score = 95.1 bits (104), Expect = 3e-14 Identities = 216/325 (66%), Gaps = 0/325 (0%) Strand=Plus/Minus Query 281742 GTGAAGATATACCTTGCACTCGCGTGGTCTTTACCACCCTGCAGCCTCGACCCAAACTGA 281801 ||||| ||||| | || ||||| ||| || || || ||||| | | || || ||| Sbjct 744168 GTGAAAATATAACGGGCGCTCGCAGCGTCCTTGCCGCCTTGCAGACGAGTTCCGAATTGA 744109 Query 281802 CCCTCCGGCAACAACCAGTTAATGTTATTGCTCCCGACGTAATCCTGAGCCAGGTTGACG 281861 || | || | | | |||| ||||| ||||| || || | | || |||||| ||| Sbjct 744108 CCGTTGGGGGAGAGCAAGTTGATGTTGTTGCTGCCAACAAAGTTTTGCGCCAGGCCGACA 744049 Query 281862 ATTGTCCCCTGAAGCGATACCTCACCGTGGTGATAGGCGCTGTGTTCGGCAACATAACCA 281921 || || | ||| || || |||||||||||||| || | ||||||| | || |||||| Sbjct 744048 ATCGTACTCTGCAGGGACACCTCACCGTGGTGGTACCCAGTGTGTTCCGATACGTAACCA 743989 Query 281922 CTGAACTGTGCTACCTTCACGTCTGATGTCAAGTTGCGTTTGAAAGCGCAATATAATACT 281981 || |||||| ||||| | || | | ||||| ||||| | | | | || Sbjct 743988 GCGAGCTGTGCAACCTTGATCTCCTTCTTGAGATTGCGCTTGAAGCAACCAAACATGACC 743929 Query 281982 TTTCGTTGAGAAGGCTTGAAACCATCAACGACAGACGGAATGCTGCGTTCCAGGTCATAC 282041 || || || |||||||| ||| || | || ||||||||| ||| |||| | Sbjct 743928 TTGCGCTGGCCAGGCTTGAGACCGTCGGCAACTGACGGAATGGAGCGCATGTTGTCAGCC 743869 Query 282042 CGCGAGAACAAAATAAGTTCCTTGT 282066 ||||| | ||| || ||||||| Sbjct 743868 ATGGAGAAGAGAATGAGCTCCTTGT 743844 >seq18 Length=639095 Score = 89.7 bits (98), Expect = 1e-12 Identities = 119/164 (73%), Gaps = 1/164 (1%) Strand=Plus/Plus Query 230437 CCATGTCGCCTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCC 230496 || |||||| | |||||||||||| | | || ||| | |||||||| || || || ||| Sbjct 159730 CCGTGTCGC-TCATTGGCATGAACTCGAAGCTCATGTGCCAGTACATTGAGTTTGTCGCC 159788 Query 230497 GACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCA 230556 |||||| | | || || || || | || || | | |||||| |||||||| | Sbjct 159789 GACCGCCTCCTCGTCGCCCTCGGCAATGACAAGATTTGGAACTCTGCAAACCCCTTCGAC 159848 Query 230557 TTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGA 230600 ||||||||| | ||||| || || || ||| | ||||| ||||| Sbjct 159849 TTTATGGAGATGATTTCCCTCCAGGGCAAGGCAAACTTTTTCGA 159892 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057823525632050