Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20guehoae_20[genbank_20GCA_5F001600415.1_202016- 03-01] 35 sequences; 33,698,914 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq18 320 2e-82 seq3 131 2e-25 seq2 123 3e-23 seq1 116 4e-21 seq6 93.3 4e-14 seq16 84.2 2e-11 seq7 82.4 8e-11 >seq18 Length=639095 Score = 320 bits (354), Expect = 2e-82 Identities = 429/590 (73%), Gaps = 10/590 (2%) Strand=Plus/Plus Query 116779 CGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTCGCTCAGGAGGTGCAGGTGGCCGA 116838 ||||||||| |||||||| || || |||||||| ||| ||||||||| | ||||| Sbjct 159215 CGACGGCATTGTCAACGAAAACCTTGTCGAGCGCTTCTGCGGCGAGGTGCAGATTGCCGA 159274 Query 116839 GGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGAGAACGTGCACTCGGAAATGTATTC 116898 ||| | ||||||||||| ||||| ||||||||| | ||||| || | ||| || Sbjct 159275 GGCCAAGACATTCTACGGCTTCCAGATTATGATGGAGAACATCCACTCTGAGACGTACTC 159334 Query 116899 GACCCTCATCGACACGTACGTGCGCTC---TTCGGAGGAGAAGCTCCGTTTGTTGAACGC 116955 | ||| |||||||||||| | ||| | || || | || |||| ||||| Sbjct 159335 GCTCCTGATCGACACGTACATTCGCGACAATGCGCGCCGGACGTACC---TGTTCAACGC 159391 Query 116956 CATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGG 117015 || |||||||| |||||| |||| |||||||||| ||||||||||||||||| | | Sbjct 159392 GATTGAGACGATCCCGTGCATCAAGAAGAAGGCCGACTGGGCGCTGCGCTGGATTTCGGA 159451 Query 117016 CAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTT 117075 | | || | |||| | |||||||||| | || || ||||||||||||||| ||||||| Sbjct 159452 CGAAAAGTCTACCTTTGCCGAGCGCCTGATTGCGTTTGCGGCCGTCGAGGGCATCTTCTT 159511 Query 117076 TTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGAC 117135 ||| ||| || || |||| |||||||||||||| ||||| |||||||| ||||| || Sbjct 159512 TTCCGGCTCGTTTGCGTCCATCTTTTGGCTCAAGAAGCGCGGTCTCATGCCGGGCCTCAC 159571 Query 117136 TTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCT 117195 ||| |||||||||||| || | |||||||||||||| ||||||||| || | || Sbjct 159572 CTTCTCCAACGAGCTCATTTCGCGCGACGAGGGTCTGCACACCGACTTTGCGTGCCTCCT 159631 Query 117196 GTTCAAGCATTTGGTGCAGCGACCGAGCGCGG-CGCGCGTCAGGGAGATCGTCACCGACG 117254 |||| || || || || ||| | ||| | || ||| |||| || ||| | Sbjct 159632 CTTCACCCACCTGCAGCGCCGCCCGCACCCGGACACG-ATCAACAAGATTATCCGCGAGG 159690 Query 117255 CGGTCGCCATCGAGCAGCGCTTCCTCACCGAAGCGCTGCCGGTGCGTCTGCTGGGACTCA 117314 ||||| || ||||| ||||||||||| ||||| || ||| || | || | | Sbjct 159691 CGGTCAAGATTGAGCAAGAGTTCCTCACCGACGCGCTCCCCGTGTCGCTCATTGGCATGA 159750 Query 117315 ATTGCGAAAC-GATGTCGCAATACATCGAGTTCGTCGCCGACAGGCTGCT 117363 | | |||| | |||| || ||||| ||||| ||||||||| | || || Sbjct 159751 ACT-CGAAGCTCATGTGCCAGTACATTGAGTTTGTCGCCGACCGCCTCCT 159799 Score = 147 bits (162), Expect = 2e-30 Identities = 162/213 (76%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 40705 AAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACA-GCGTGCAAAC 40763 || ||||||||||| || || |||||| |||| ||||| | | |||| | || ||| Sbjct 12924 AAGACGCTCACGGGAAAGACGATCACCCTCGAGGTCGAGTCGTCGGACACGATTGACAAC 12983 Query 40764 GCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTA 40823 | ||||| || || | ||||| ||||| |||||| |||||||||| || ||||||| Sbjct 12984 G-TCAAGTCGAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAGCAGCGTCTCATCTT 13042 Query 40824 CGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGC 40883 ||| ||||| ||||| || |||| |||||||| |||||||||||||||||||||| | Sbjct 13043 CGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTGTCCGACTACAACATCCAGAAGGAGTC 13102 Query 40884 CACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||| || || || | ||| || | || || Sbjct 13103 GACGCTCCACCTCGTCCTTCGCCTGCGTGGTGG 13135 Score = 116 bits (128), Expect = 4e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || || ||||| ||||||||| | || ||||| | || Sbjct 12486 ATGCAGATCTTCGTCAAGACCCTTACCGGCAAGACCATCACCCTTGAGGTCGAGTCTTCC 12545 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| | ||| || || | ||||| |||||||| || | ||||| Sbjct 12546 GACACGATCGACAACG-TGAAGAGCAAGATCCAGGACAAGGAGGGCATTCCTCCCGACCA 12604 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||| | |||||| || ||||| || |||| ||||| | || ||||| Sbjct 12605 GCAGCGTCTCATTTTCGCGGGAAAGCAGCTCGAGGACGGCCGCACATTGTCTGATTACAA 12664 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||||||||||| | ||||| || || || | ||| || | || || Sbjct 12665 CATCCAGAAGGAGTCGACGCTTCACCTCGTTCTCCGCCTGCGTGGTGG 12712 Score = 82.4 bits (90), Expect = 8e-11 Identities = 105/144 (73%), Gaps = 3/144 (2%) Strand=Plus/Plus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||||| |||||||||| ||||| | ||||||| | |||| Sbjct 159022 ATCTGGCAGATGTACAAGAAGGCGCAGGCGTCGTTTTGGACGGCCGAGGAGATCAACCTC 159081 Query 116696 TCCAAGGACACGAGCGACTGGGAGCGCTTG---AACGACAACGAGCGCCATTTCATCAAG 116752 | ||| | ||||||||| | | ||||||||||||||| | || ||| || Sbjct 159082 GCGCCCGACCTGCACGACTGGGACAACAAGCTCAACGACAACGAGCGCTACTTTATCGAG 159141 Query 116753 CACGTGCTGGCCTTTTTCGCCGCC 116776 ||||| ||||| || || || ||| Sbjct 159142 CACGTCCTGGCGTTCTTTGCTGCC 159165 >seq3 Length=2791342 Score = 131 bits (144), Expect = 2e-25 Identities = 144/189 (76%), Gaps = 2/189 (1%) Strand=Plus/Plus Query 40711 CTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGT-GCAAACGCTCAA 40769 ||||||||||| ||||||||| | || || || | | |||| | | | |||| |||| Sbjct 1929754 CTCACGGGCAAGACCATCACCCTTGAGGTGGAGTCTTCGGACACCATCGACAACG-TCAA 1929812 Query 40770 GGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGG 40829 | || || | ||||| |||||||||||| | |||||||| || ||||||| ||| || Sbjct 1929813 GTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAGCAGCGCCTCATCTTCGCCGG 1929872 Query 40830 CAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCT 40889 ||| ||||| || |||| |||||||| ||||||||||||||||||||| | || || Sbjct 1929873 CAAGCAGCTCGAGGACGGCCGCACCCTTTCGGACTACAACATCCAGAAGGAGTCGACCCT 1929932 Query 40890 GCATCTAGT 40898 || || || Sbjct 1929933 TCACCTTGT 1929941 >seq2 Length=3829864 Score = 123 bits (136), Expect = 3e-23 Identities = 167/226 (74%), Gaps = 9/226 (4%) Strand=Plus/Plus Query 116982 AGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCC 117041 |||||||||| |||||||| | || | | | || | ||| |||| || ||||| Sbjct 2322207 AGAAGGCCGACTGGGCGCTCAAGTACATTAC-GCCCGATATGCC--CTTCCGCACGCGCC 2322263 Query 117042 TGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTC-GGGCAGTTTCGCCGCCATATTT 117100 || | || || || || |||||| |||||||||| |||| |||| || || || ||| Sbjct 2322264 TGATTGCGTTTGCCTGTGTGGAGGGCATCTTCTTTTCTGGGCCGTTT-GCTGCAATCTTT 2322322 Query 117101 TGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGAC--TTTCAGCAACGAGCTCATCTCCA 117158 ||||||||||| ||||||||||||| || || || ||||| |||||||||||| | Sbjct 2322323 TGGCTCAAGAAGCGCGGCCTCATGCGTGGTCTTACGTTTTCA--AACGAGCTCATCAGCC 2322380 Query 117159 GGGACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCA 117204 | |||||||| ||| ||||||||| || ||||| | ||| || Sbjct 2322381 GCGACGAGGGAACCCATACCGACTTTGCGTGCTTGCTATACAACCA 2322426 >seq1 Length=3969531 Score = 116 bits (128), Expect = 4e-21 Identities = 122/158 (77%), Gaps = 2/158 (1%) Strand=Plus/Minus Query 40711 CTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACA-GCGTGCAAACGCTCAA 40769 ||||||||||| ||||||||| |||| ||||| || | |||| | || |||| |||| Sbjct 1130263 CTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCGGACACGATTGACAACG-TCAA 1130205 Query 40770 GGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGG 40829 | || || | ||||| |||||||||||| | |||||||| || ||||||| ||| || Sbjct 1130204 GTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAGCAGCGTCTCATCTTCGCCGG 1130145 Query 40830 CAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867 ||| ||||| || |||| |||||||| ||||||| Sbjct 1130144 CAAGCAGCTCGAGGACGGCCGCACCCTTTCGGACTACA 1130107 >seq6 Length=2162681 Score = 93.3 bits (102), Expect = 4e-14 Identities = 106/140 (76%), Gaps = 2/140 (1%) Strand=Plus/Plus Query 139378 GCACGGCTTCCACGTGCACGAGTTCGGCGACGCGAGCAACGGGTGCACGTCGGCCGGCGA 139437 ||||||||||||||||||| ||| |||||| | ||| ||| | || |||||| Sbjct 1199006 GCACGGCTTCCACGTGCACACGTTTGGCGACATTTCCGGCGGCTGCGCTTCCACCGGCGG 1199065 Query 139438 GCACTTCAACCCCGCGCGCCGGGAC-CACGGCGCGCCCGACGCCGAGATCAGGCACGTCG 139496 ||||| ||||| || | ||| |||||||||||||||||| ||| | | ||||||| Sbjct 1199066 CCACTTTAACCCTTA-CGACAAGACGCACGGCGCGCCCGACGCCAAGAACCGCCACGTCG 1199124 Query 139497 GCGACCTGGGCAACCTCGAG 139516 | ||||| |||||| || || Sbjct 1199125 GTGACCTCGGCAACATCAAG 1199144 >seq16 Length=1014063 Score = 84.2 bits (92), Expect = 2e-11 Identities = 102/139 (73%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 139378 GCACGGCTTCCACGTGCACGAGTTCGGCGACGCGAGCAACGGGTGCACGTCGGCCGGCGA 139437 ||||||||||||||||||| ||||||||||| | | |||||||| | | |||| Sbjct 1003013 GCACGGCTTCCACGTGCACCAGTTCGGCGACCTGTCCTCCGGGTGCATGAGCACGGGCGC 1002954 Query 139438 GCACTTCAACCCCGCGCGCCGGGACCACGGCGCGCCCGACGCCGAGATCAGGCACGTCGG 139497 ||||| |||||| || ||||||||||| || || | ||| | ||||| | || Sbjct 1002953 GCACTACAACCCGTTCAACCACGACCACGGCGCACCGTCCGACAAGAACCGGCACATTGG 1002894 Query 139498 CGACCTGGGCAACCTCGAG 139516 ||||| |||||| || || Sbjct 1002893 GGACCTTGGCAACATCAAG 1002875 >seq7 Length=1438143 Score = 82.4 bits (90), Expect = 8e-11 Identities = 104/142 (73%), Gaps = 6/142 (4%) Strand=Plus/Minus Query 139378 GCACGGCTTCCACGTGCACGAGTTCGGCGACGCGAGCAACGGGTGCACGTCGGCCGGCGA 139437 || |||||||||| | ||| ||| ||| ||| ||||| ||||| |||||||||| Sbjct 194163 GCGCGGCTTCCACATCCACCAGTACGGTGACAACTCGAACGGCTGCACCTCGGCCGGCGC 194104 Query 139438 GCACTTCAACCCCGCGCGCCGGGACCACGGCG---CGCCCGACGCCGAGATCAGGCACGT 139494 |||||||||||| || | ||||||||| | ||||| ||||| | ||||| Sbjct 194103 CCACTTCAACCCCCACGGCAAGAACCACGGCGGCCCCACCGACACCGAG---CGCCACGT 194047 Query 139495 CGGCGACCTGGGCAACCTCGAG 139516 ||| ||||| |||||| || || Sbjct 194046 CGGTGACCTCGGCAACGTCAAG 194025 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515218974591600