Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20guehoae_20[genbank_20GCA_5F001600415.1_202016- 03-01] 35 sequences; 33,698,914 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq18 125 6e-24 seq3 93.3 4e-14 seq1 93.3 4e-14 >seq18 Length=639095 Score = 125 bits (138), Expect = 6e-24 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| || || ||||||||||| || ||||| ||||||||||| ||||| Sbjct 12682 GTCGACTCCTTCTGGATGTTGTAATCAGACAATGTGCGGCCGTCCTCGAGCTGCTTTCCC 12623 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 ||| | |||||||||||||| |||||||| |||||||||||||| || || || Sbjct 12622 GCGAAAATGAGACGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTC 12563 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | |||| ||||| | ||||||||| | ||| | || |||||||| || || Sbjct 12562 ACGTTGTCGATCGTGTCGGAAGACTCGACCTCAAGGGTGATGGTCTTGCCGGTAAGGGTC 12503 Query 118722 TTTACAAAAATCTGCAT 118738 || || || |||||||| Sbjct 12502 TTGACGAAGATCTGCAT 12486 Score = 102 bits (112), Expect = 7e-17 Identities = 103/134 (77%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 118584 TCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTG 118643 ||||||||||| || || ||| ||||||| |||||||| ||||| || |||||||||||| Sbjct 12362 TCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGGGGAATGCCCTCCTTG 12303 Query 118644 TCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACC 118703 || ||| || || || | |||| |||||||| | ||||||||| | || | Sbjct 12302 TCCTGAATCTTCGACTTGACGTTGTCGATGGTGTCCGAGGACTCGACCTCAAGAGTGATG 12243 Query 118704 GTTTTGCCGGTCAG 118717 || ||||||||||| Sbjct 12242 GTCTTGCCGGTCAG 12229 Score = 102 bits (112), Expect = 7e-17 Identities = 136/189 (72%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| || ||||| || || |||||||| ||| || ||||| ||||||||||| Sbjct 13112 GTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCCTCGAGCTG 13053 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654 || || ||| |||||||||||||||| || || || || ||||||||||| || || Sbjct 13052 CTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTT 12993 Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714 || || | || | ||||||| ||||||||||| ||| | ||| || || || Sbjct 12992 CGACTTGACGTTGTCAATCGTGTCCGACGACTCGACCTCGAGGGTGATCGTCTTTCCCGT 12933 Query 118715 CAGAGTTTT 118723 || || || Sbjct 12932 GAGCGTCTT 12924 Score = 91.5 bits (100), Expect = 1e-13 Identities = 101/135 (75%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 118584 TCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTG 118643 ||||||||||| || || ||| |||| || |||||||| ||||| || |||||||||||| Sbjct 12040 TCCTCGAGCTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCGGGGGGAATGCCCTCCTTG 11981 Query 118644 TCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACC 118703 || || || || || | |||| |||||||| | ||||||||| | ||| | Sbjct 11980 TCCTGGATCTTCGACTTGACGTTGTCGATGGTGTCCGAGGACTCGACCTCAAGGGTGATG 11921 Query 118704 GTTTTGCCGGTCAGA 118718 || ||||| || ||| Sbjct 11920 GTCTTGCCAGTGAGA 11906 >seq3 Length=2791342 Score = 93.3 bits (102), Expect = 4e-14 Identities = 126/176 (72%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| || || |||||||| || | ||||| ||||||||||| || || Sbjct 1929929 GTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCG 1929870 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 ||| ||||||| |||||||| ||||| || |||||||||||||| || || || Sbjct 1929869 GCGAAGATGAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTG 1929810 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAG 118717 || | |||| |||||||| ||| ||||| | ||| | || ||||| || || Sbjct 1929809 ACGTTGTCGATGGTGTCCGAAGACTCCACCTCAAGGGTGATGGTCTTGCCCGTGAG 1929754 >seq1 Length=3969531 Score = 93.3 bits (102), Expect = 4e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 118584 TCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTG 118643 ||||||||||| || || ||| |||||||||||||||| ||||| || |||||||||||| Sbjct 1130130 TCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTG 1130189 Query 118644 TCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACC 118703 || || || || || | || | ||||||| | ||||||||||| ||| | Sbjct 1130190 TCCTGGATCTTGGACTTGACGTTGTCAATCGTGTCCGAGGACTCGACCTCGAGGGTGATG 1130249 Query 118704 GTTTTGCCGGTCAG 118717 || ||||| || || Sbjct 1130250 GTCTTGCCCGTGAG 1130263 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433830214944220