Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20guehoae_20[genbank_20GCA_5F001600415.1_202016- 03-01] 35 sequences; 33,698,914 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq18 120 3e-22 seq3 96.9 4e-15 seq1 89.7 6e-13 >seq18 Length=639095 Score = 120 bits (132), Expect = 3e-22 Identities = 144/193 (75%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || |||||||||| || || || |||| || |||||||| || ||||| Sbjct 12677 CTCCTTCTGGATGTTGTAATCAGACAATGTGCGGCCGTCCTCGAGCTGCTTTCCCGCGAA 12618 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||||| || | || |||||||||| ||| || || | ||| Sbjct 12617 AATGAGACGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTCA-CGT 12559 Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | ||||||| || || || || | |||||||| ||||| || || ||||| | Sbjct 12558 TGTCGATCGTGTCGGAAGACTCGACCTCAAGGGTGATGGTCTTGCCGGTAAGGGTCTTGA 12499 Query 43171 CAAAGATTTGCAT 43183 | ||||| ||||| Sbjct 12498 CGAAGATCTGCAT 12486 Score = 102 bits (112), Expect = 9e-17 Identities = 131/178 (74%), Gaps = 2/178 (1%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || | ||| || || |||| || |||||||| || ||||| Sbjct 13100 CTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 13041 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | || | | |||||||||| ||| || |||| ||| Sbjct 13040 GATGAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTCGACTTGA-CGT 12982 Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168 | | | |||||| ||| || || |||| ||||| || || ||||| |||||||| Sbjct 12981 TGTCAATCGTGTCCGACGACTCGACCTCGAGGGTGATCGTCTTTCCCGTGAGCGTCTT 12924 >seq3 Length=2791342 Score = 96.9 bits (106), Expect = 4e-15 Identities = 126/172 (73%), Gaps = 2/172 (1%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || | || || || |||| || |||||||| || ||||| Sbjct 1929924 CTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 1929865 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||||| || | || |||||||||| ||| || |||| ||| Sbjct 1929864 GATGAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGT 1929806 Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAG 43162 | | | ||||| || ||||| || | |||||||| |||||||| || Sbjct 1929805 TGTCGATGGTGTCCGAAGACTCCACCTCAAGGGTGATGGTCTTGCCCGTGAG 1929754 >seq1 Length=3969531 Score = 89.7 bits (98), Expect = 6e-13 Identities = 116/158 (73%), Gaps = 2/158 (1%) Strand=Plus/Plus Query 43006 TGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCT 43065 |||| || | || || || |||| || |||||||| || ||||| ||||| ||||||| Sbjct 1130107 TGTAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCT 1130166 Query 43066 GGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCG 43124 |||||| || | || |||||||||| ||| || |||| ||| | | | |||||| Sbjct 1130167 GGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGTTGTCAATCGTGTCC 1130225 Query 43125 CTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAG 43162 || || || |||| |||||||| |||||||| || Sbjct 1130226 GAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAG 1130263 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571817349829800