Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20guehoae_20[genbank_20GCA_5F001600415.1_202016- 03-01] 35 sequences; 33,698,914 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq18 122 6e-23 seq3 95.1 8e-15 seq1 89.7 3e-13 >seq18 Length=639095 Score = 122 bits (134), Expect = 6e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | || || ||||| | || || ||||| |||||||| || ||| Sbjct 12712 CCACCACGCAGGCGGAGAACGAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAATCAGAC 12653 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 | ||| |||| || | |||||| || ||||||||||| |||||||||||| || Sbjct 12652 AATGTGCGGCCGTCCTCGAGCTGCTTTCCCGCGAAAATGAGACGCTGCTGGTCGGGAGGA 12593 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||||||| ||||| ||| | | | | |||| |||| || ||||| Sbjct 12592 ATGCCCTCCTTGTCCTGGATCTTGCTCTTCACGTTGTCGATCGTGTCGGAAGACTCGACC 12533 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | |||||||| |||||||| || || || || ||||||||||| Sbjct 12532 TCAAGGGTGATGGTCTTGCCGGTAAGGGTCTTGACGAAGATCTGCAT 12486 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | || || ||||| | || || ||||| ||||||||||||||| Sbjct 13135 CCACCACGCAGGCGAAGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAC 13076 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| |||| || | ||||||||| ||||| ||||| ||||||||||| ||| Sbjct 13075 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGGGGG 13016 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | | ||||||||| ||||| ||| | | | | |||| || | ||| ||||| Sbjct 13015 ATACCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCAATCGTGTCCGACGACTCGACC 12956 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTT 34374 || | ||||| || || || ||||| || || Sbjct 12955 TCGAGGGTGATCGTCTTTCCCGTGAGCGTCTT 12924 Score = 82.4 bits (90), Expect = 5e-11 Identities = 113/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 34212 TGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCT 34271 ||||||| || || ||| |||| || | ||||||||| ||||| || || ||||||| Sbjct 12063 TGTAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATAAGGCGCTGCT 12004 Query 34272 GGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGG 34331 ||||| ||| | || ||||||||| ||||| ||| | | | | || | || | Sbjct 12003 GGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTGTCCG 11944 Query 34332 TCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGA 34369 || ||||| || | |||||||| ||||| |||||| Sbjct 11943 AGGACTCGACCTCAAGGGTGATGGTCTTGCCAGTGAGA 11906 >seq3 Length=2791342 Score = 95.1 bits (104), Expect = 8e-15 Identities = 123/170 (72%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| ||||||||||| || || ||| |||| || | ||||||||| ||||| Sbjct 1929923 TCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAG 1929864 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 ||||| |||||||||||| ||| | || ||||||||| ||||| ||| | | | Sbjct 1929863 ATGAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTG 1929804 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAG 34368 | || | || | || || || || | |||||||| ||||| ||||| Sbjct 1929803 TCGATGGTGTCCGAAGACTCCACCTCAAGGGTGATGGTCTTGCCCGTGAG 1929754 >seq1 Length=3969531 Score = 89.7 bits (98), Expect = 3e-13 Identities = 114/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 34212 TGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCT 34271 ||||||| || || ||| |||| || | ||||||||| ||||| ||||| ||||||| Sbjct 1130107 TGTAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCT 1130166 Query 34272 GGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGG 34331 ||||| ||| | || ||||||||| ||||| ||| | | | | |||| || | Sbjct 1130167 GGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATCGTGTCCG 1130226 Query 34332 TCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAG 34368 || ||||| || | |||||||| ||||| ||||| Sbjct 1130227 AGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAG 1130263 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323071862189600