Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20guehoae_20[genbank_20GCA_5F001600415.1_202016- 03-01] 35 sequences; 33,698,914 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq1 233 4e-56 seq16 93.3 9e-14 >seq1 Length=3969531 Score = 233 bits (258), Expect = 4e-56 Identities = 612/925 (66%), Gaps = 28/925 (3%) Strand=Plus/Minus Query 248818 TACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAG 248877 ||| | | ||||| ||||| || |||||| || ||||||||||| | || |||||| Sbjct 1697390 TACAACTACTTTGGCTTCAAGACCCTGGAGCGCTCCTATCTCCTCAAGGTCGACGGCAAG 1697331 Query 248878 ATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGAC 248937 || | || || ||||||||| | ||||| || || ||||| || ||| || || Sbjct 1697330 ATTGCCGAGCGTCCCCAGCACATGCTTATGCGTGTTGCCGTCGGTATCCACGGCGACAAC 1697271 Query 248938 ATAGAGAGCGTGCTCGAGACGTACACCGGAATGAGTGAACGCTGGATGACACATGCCACA 248997 || || | || |||||||| |||| | ||| |||| | || || || | Sbjct 1697270 ATTGAAAAGGTTCTCGAGACCTACAACCTCATGTCGTCGCGCTACTTTACGCACGCGTCG 1697211 Query 248998 CCGACGCTCTTCAACGCCGGTACCGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTGCC 249057 || || |||||||||||||||||| || || || |||||||| || | || Sbjct 1697210 CCCACCCTCTTCAACGCCGGTACCCCGCACGCACAAATGTCGTCGTGCTTCCTCGTCGCG 1697151 Query 249058 ATGCAAGACGACTCTGTCGACGGCATTTATGACACGCTTAAACAGACG---GCGAAGATT 249114 ||| | |||||||| | |||||||| || |||||||| || ||| ||| |||| Sbjct 1697150 ATGAAGGACGACTCGATTGACGGCATCTACGACACGCTCAA---GACCTGTGCGCAGATC 1697094 Query 249115 TCTAAATTCGCGGGCGGAATCGGTCTCTCCGTCTCCAACATCCGAGCGAAGGGTTCGTAC 249174 || || || || || || |||||| | | |||||| || || ||||| |||||| Sbjct 1697093 TCCAAGACTGCTGGTGGTATTGGTCTCCACATTCACAACATTCGTGCCAAGGGCTCGTAC 1697034 Query 249175 ATCAAAGGTACAAATGGGGTCAGTGATGGTATCGTACCCCTCCTTCGATGCTTTGAGTCC 249234 || ||||| || || | | |||||||| ||| | || || || || | Sbjct 1697033 ATTGCGGGTACCAACGGCTACTCGAACGGTATCGTCCCCATGCTCCGTGCCTACGATGCG 1696974 Query 249235 ACCGCCAGGTTCATCAACCAGGCCGG------GCGCCGAAAGGGGTCGTTCGCCATGTAT 249288 || ||| | | | || |||||| ||| ||||| | || | || ||||| || Sbjct 1696973 ACGGCCCGTTACGTCGACCAGGGCGGCAACAAGCGCCCA---GGTGCCTTTGCCATCTAC 1696917 Query 249289 TTGGAAGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAGAACAACGGCAAC 249348 | || ||||||||||| | || || ||||| ||| | |||||| ||||||| Sbjct 1696916 CTCGAGCCCTGGCACGCCGACGTCTTTGACTTCCTCGACCTCCGCAAGAACCACGGCAAG 1696857 Query 249349 GAGCTCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGACTTGTTCATGCGC 249408 ||| | | || |||||||||||||||| |||||| || ||||| |||||||| Sbjct 1696856 GAGGAAGTCCGTGCTCGTGACCTCTTCTACGCGCTGTGGATCCCCGACCTGTTCATGAAG 1696797 Query 249409 CGCGTCAAGGCCGACGGCGATTGGACGCTTCTTTCTCCGTCCGAC-GCCCCGGACCTCAT 249467 || ||| || ||||| || |||||||| | | || |||| ||||||| |||| Sbjct 1696796 CGTGTCGAGATGGACGGTGACTGGACGCTCATGTGCCCCGCCGAGTGCCCCGG-CCTCGC 1696738 Query 249468 CGATCTACACGGCGCCGACTTCGACCAAGCCTATAAGAAATACGAATCCAACGGCATCGG 249527 |||| | ||| | || ||||| | ||| || ||||| ||||| || Sbjct 1696737 CGATGTCCACTCGGAGGAATTCGAGGAGCTCTACCTGAGCTACGAGCGTGCCGGCAAGGG 1696678 Query 249528 C---AAGACAATCAAGGCTCGGACCCTTT---TTGCGAAGGTGGTGGAGTCCCAGATAGA 249581 | ||||| |||||||| | | || | |||| | | | ||| | |||| || Sbjct 1696677 CCGCAAGACGATCAAGGCGCAAAAGCTCTGGTTTGCCA---TTCTCGAGGCTCAGACTGA 1696621 Query 249582 GACAGGGGGGCCGTATTATT-TGTTCAAAGACGCGTGCAACGCCAAGAGTAACCAACGGC 249640 ||| || || || | | || | | ||| |||||| |||| |||| ||||| | || Sbjct 1696620 GACTGGCGGTCCCT-TCATGCTCTACAAGGACGCGGCCAACAGCAAGTCGAACCAGCAGC 1696562 Query 249641 ATCTTGGTACCATCCGCTCGTCAAATCTCTGTGCAGAGGTGATTCAATACTCGTCCAAGG 249700 | || || || ||| ||||| || ||||| | ||| | || | |||||||| | Sbjct 1696561 ACCTCGGCACGATCAAGTCGTCCAACCTCTGCACTGAGATCATCGAGTACTCGTCGCCCG 1696502 Query 249701 AGGAGATTGCCGTCTGCAACCTGGC 249725 | ||| | |||||||||||||| || Sbjct 1696501 ACGAGGTCGCCGTCTGCAACCTTGC 1696477 >seq16 Length=1014063 Score = 93.3 bits (102), Expect = 9e-14 Identities = 237/358 (66%), Gaps = 31/358 (9%) Strand=Plus/Minus Query 254001 CTTCCTCATTTGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGCG 254060 || || ||| |||| ||| |||| |||||||||||||||||||| || |||||||| || Sbjct 192109 CTCCCCCATATGCTCTTCTACGGACCTCCCGGAACAGGCAAGACCTCGACCATCCTCGCC 192050 Query 254061 CTGGCCCGAACCCTGTTGGGCGAGGGGAACA--TGAGAGAGCGCGTGCTCGAGCTGAACG 254118 || || || || || || | || | | | ||||| ||||| || |||| Sbjct 192049 CTCGCGCGCCAGCTCTTCGG--ACCCGACCTGTTCCGCTCCCGCGTCCTCGAACTCAACG 191992 Query 254119 CTTCTGACGAACGCGGGTTGGACGTCGTCCGCGACAAGATCAAGACTTTCTC---CAAGA 254175 | || ||||| || || | ||||| ||||| ||||||||||| || | | ||| Sbjct 191991 CATCCGACGAGCGTGGTATCACAGTCGTGCGCGAGAAGATCAAGACGTTTGCGCGCGAGA 191932 Query 254176 TG--TCGATTT-----CGTCGTT--CCAACC---CGGC------------TGTCCGCCTT 254211 ||| | ||| | ||| | |||| || ||||| | Sbjct 191931 CACCTCGCCATGCACCCGTGGGCGGCCAGTCGGACGGCAACACATACCCATGCCCGCCGT 191872 Query 254212 TCAAGCTCGTGATCCTGGACGAGGCGGACACCATGACGGCCGACGCGCAGTCCGCCCTCC 254271 ||||||| | ||||| |||||||| ||| | ||||| ||||||||| ||| ||| Sbjct 191871 ACAAGCTCATTATCCTCGACGAGGCCGACTCGATGACCCAGGACGCGCAGAGCGCTCTCA 191812 Query 254272 GCCGAACGATGGAGACGCACTCCGTTGTGACGCGTTTTTGCCTGGTGTGCAACTACGT 254329 | || | ||||||||| |||| | ||||| || ||||| ||||||||||| || Sbjct 191811 GGCGTATCATGGAGACGTACTCGCGCATCACGCGGTTCTGCCTCGTGTGCAACTATGT 191754 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073765918482880