Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20guehoae_20[genbank_20GCA_5F001600415.1_202016- 03-01] 35 sequences; 33,698,914 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq1 320 1e-82 seq18 194 1e-44 seq2 98.7 9e-16 >seq1 Length=3969531 Score = 320 bits (354), Expect = 1e-82 Identities = 639/939 (68%), Gaps = 6/939 (1%) Strand=Plus/Plus Query 23017 GACGGCGATCGAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAAT 23076 || ||| || || ||||| ||||| ||||| |||||||| |||| |||||| | || Sbjct 1696464 GAGGGCAATGGACGCAAGGTTGCAGACGGCGACCTCGTCGGGCGACGAGTACTCGATGAT 1696523 Query 23077 TTCGGTACATAGATTGCTACACTTTATCGTGCCCAAATTGCT-CTGGTTGCTTTTTCGAT 23135 || || || || ||| |||| |||||||| | | ||| |||||| || | | Sbjct 1696524 CTCAGTGCAGAGGTTGGACGACTTGATCGTGCCGAGGT-GCTGCTGGTTCGACTTGCTGT 1696582 Query 23136 TGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCG 23195 || || ||||||||||||||| | || ||| ||||| ||| | ||||| || | Sbjct 1696583 TGGCCGCGTCCTTGTAGAGCATGAAGGGACCGCCAGTCTCAGTCTGAGCCTCGAGAATGG 1696642 Query 23196 CTCGCCACATAGTCTGAGCGTGAACACGTCGCACGTACCT-GCCTTCTTCCTCGTACTTT 23254 | ||| | | || || | | |||| || ||| ||| | |||||| | Sbjct 1696643 CAAACCAGAGCTTTTGCGCCTTGAT-CGTCTTGCGGCCCTTGCCGGCACGCTCGTAGCTC 1696701 Query 23255 TGGTACAACGCGTCAAATTCGGCACCGTA-ACAGTCGGCCAGGCCGGGCGATTGCATCGG 23313 |||| | | | || ||||| | || ||| ||||| |||||||| | | || Sbjct 1696702 AGGTAGAGCTCCTCGAATTCCTCCGAGTGGACA-TCGGCGAGGCCGGGGCACTCGGCGGG 1696760 Query 23314 ACACATGAGACTCCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCA 23373 |||||||| |||| ||| | || || || |||| || || || || ||||| Sbjct 1696761 GCACATGAGCGTCCAGTCACCGTCCATCTCGACACGCTTCATGAACAGGTCGGGGATCCA 1696820 Query 23374 TAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATC 23433 || |||||||| || || || || || || ||||| |||||| |||||| | || Sbjct 1696821 CAGCGCGTAGAAGAGGTCACGAGCACGGACTTCCTCCTTGCCGTGGTTCTTGCGGAGGTC 1696880 Query 23434 CAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCT 23493 | ||||| || ||||| || ||||| ||||||||||| | |||||| || || || | Sbjct 1696881 GAGGAAGTCAAAGACGTCGGCGTGCCAGGGCTCGAGGTAGATGGCAAAGGCACCTGGGCG 1696940 Query 23494 CTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCAC 23553 ||| ||||||||||| ||||||||||||||||| | ||| | | ||||| || || Sbjct 1696941 CTTGTTGCCGCCCTGGTCGACGTAACGGGCCGTCGCATCGTAGGCACGGAGCATGGGGAC 1697000 Query 23554 GAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTG 23613 || |||||| || |||| ||||| | ||| || || || |||| |||||| Sbjct 1697001 GATACCGTTCGAGTAGCCGTTGGTACCCGCAATGTACGAGCCCTTGGCACGAATGTTGTG 1697060 Query 23614 AACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTC 23673 || ||||| ||| || || || | | || || ||| ||| || || || ||||| Sbjct 1697061 AATGTGGAGACCAATACCACCAGCAGTCTTGGAGATCTGCGCACAGGTCTTGAGCGTGTC 1697120 Query 23674 GTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGC 23733 ||||||||| || || ||| || || ||||||| | ||| ||||| |||||||| || Sbjct 1697121 GTAGATGCCGTCAATCGAGTCGTCCTTCATCGCGACGAGGAAGCACGACGACATTTGTGC 1697180 Query 23734 TTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACAT 23793 | || ||| |||| ||| || || || |||||||||||||| | |||||| Sbjct 1697181 GTGCGGGGTACCGGCGTTGAAGAGGGTGGGCGACGCGTGCGTAAAGTAGCGCGACGACAT 1697240 Query 23794 TAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCG 23853 || ||||| || |||| | ||||||| || ||||| ||||||| ||| || || Sbjct 1697241 GAGGTTGTAGGTCTCGAGAACCTTTTCAATGTTGTCGCCGTGGATACCGACGGCAACACG 1697300 Query 23854 CATCATCATGTATTGAGGTCTCTCGACCGTGACGCCGTTAATTTTGAACAGATATGAACG 23913 ||| | ||||| || || | |||| | | ||||| | |||| ||||| || || Sbjct 1697301 CATAAGCATGTGCTGGGGACGCTCGGCAATCTTGCCGTCGACCTTGAGGAGATAGGAGCG 1697360 Query 23914 TTGCATCGTTTTAAATCCAAAATAGTCATAGTTAAAGTC 23952 | || || || || ||||| |||| ||| ||||||| Sbjct 1697361 CTCCAGGGTCTTGAAGCCAAAGTAGTTGTAGCTAAAGTC 1697399 >seq18 Length=639095 Score = 194 bits (214), Expect = 1e-44 Identities = 460/685 (67%), Gaps = 10/685 (1%) Strand=Plus/Plus Query 57711 TCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAAGAAGTGCAAGTGACG 57770 ||||| || ||||| ||||| || | ||||| | || | || ||||| | | Sbjct 159213 TCCGACGGCATTGTCAACGAAAACCTTGTCGAGCGCTTCTGCGGCGAGGTGCAGATTGCC 159272 Query 57771 GAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATGTAT 57830 ||||| | || ||||| || || | || || ||| | || || || | ||| Sbjct 159273 GAGGCCAAGACATTCTACGGCTTCCAGATTATGATGGAGAACATCCACTCTGAGACGTAC 159332 Query 57831 TCGCTACTCATCGATACGTACGTGAAGGACAACGA-CGAGAAACGTAGACTGTTCAACGC 57889 ||||| || ||||| |||||| | ||||| | || ||||| ||||||||||| Sbjct 159333 TCGCTCCTGATCGACACGTACATTCGCGACAATGCGCGCCGGACGTAC-CTGTTCAACGC 159391 Query 57890 GATCGAAACAATGCCCGCG-ATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATAAAAA 57948 ||| || || || |||| | ||| |||||||| || ||| | | ||||| Sbjct 159392 GATTGAGACGAT-CCCGTGCATCAAGAAGAAGGCCGACTGGGCGCTGCGCTGGATTTCGG 159450 Query 57949 GCGCCACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCT 58008 || | | | || || |||||| | || || ||||| || |||||||| || || |||| Sbjct 159451 ACGAAAAGTCTACCTTTGCCGAGCGCCTGATTGCGTTTGCGGCCGTCGAGGGCATCTTCT 159510 Query 58009 TTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGA 58068 |||| ||| |||||| | || |||||| | ||||| ||||| || ||||| ||||| | Sbjct 159511 TTTCCGGCTCGTTTGCGTCCATCTTTTGGCTCAAGAAGCGCGGTCTCATGCCGGGCCTCA 159570 Query 58069 CGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAA 58128 | || ||||||| | || ||||||||||||||||| || || || ||||||||||| Sbjct 159571 CCTTCTCCAACGAGCTCATTTCGCGCGACGAGGGTCTGCACACCGACTTTGCGTGCCTCC 159630 Query 58129 TGTACTCTCACATTGTCAATAAACCG-ACGCGGGATCGCATCTTGGACATTATCACCGAG 58187 | | | | ||| | ||| || ||| || ||| | |||||| |||| Sbjct 159631 TCTTCACCCACCTGCAGCGCCGCCCGCACCCGGACACG-ATCAACAAGATTATCCGCGAG 159689 Query 58188 GCGGTCGCGATCGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATG 58247 |||||| ||| || | ||||| ||||||| || || || ||| | | | || ||| Sbjct 159690 GCGGTCAAGATTGAGCAAGAGTTCCTCACCGACGCGCTCCCCGTGTCGCTCATTGGCATG 159749 Query 58248 AACAATGATTTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGACTTTTGCTCGAACT- 58306 ||| | | |||| |||||||||||||||| |||||| | || | ||| || Sbjct 159750 AACTCGAAGCTCATGTGCCAGTACATTGAGTTTGTCGCCGACCGCCTCCTCGTCGCCCTC 159809 Query 58307 -GATTGGAGAGCGTCATTACAACACGAAAAATCCGTTTGATTTTATGAATCTGATCTCGC 58365 | || | | || ||| | ||| || || || |||||| | |||| || | Sbjct 159810 GGCAATGACAAGAT--TTGGAACTCTGCAAACCCCTTCGACTTTATGGAGATGATTTCCC 159867 Query 58366 TCGAGGGCAAGACAAACTTTTTCGA 58390 || |||||||| ||||||||||||| Sbjct 159868 TCCAGGGCAAGGCAAACTTTTTCGA 159892 Score = 104 bits (114), Expect = 2e-17 Identities = 164/232 (71%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| || || ||||| || |||||| | || || || | ||| Sbjct 12486 ATGCAGATCTTCGTCAAGACCCTTACCGGCAAGACCATCACCCTTGAGGTCGAGTCTTCC 12545 Query 31253 GACAGTGTCGAAACGGTCAAACAGAG-AATAGC--GGACAAGGAAGGCGTGCCGCCCGAC 31309 |||| |||| | || || ||| || | | ||||||||| ||| | || |||||| Sbjct 12546 GACACGATCGACAACGTGAA---GAGCAAGATCCAGGACAAGGAGGGCATTCCTCCCGAC 12602 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 ||||||||||| || ||||| || || ||| | || ||| || || ||||| Sbjct 12603 CAGCAGCGTCTCATTTTCGCGGGAAAGCAGCTCGAGGACGGCCGCACATTGTCTGATTAC 12662 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||| || || || ||||| ||||| || || || | ||| | || |||| Sbjct 12663 AACATCCAGAAGGAGTCGACGCTTCACCTCGTTCTCCGCCTGCGTGGTGGTA 12714 Score = 93.3 bits (102), Expect = 4e-14 Identities = 149/214 (70%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 31208 AAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCGAAACG 31267 ||||| || || || || ||||||||| |||| || || |||| |||| | || | Sbjct 12924 AAGACGCTCACGGGAAAGACGATCACCCTCGAGGTCGAGTCGTCGGACACGATTGACAAC 12983 Query 31268 GTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAATATTC 31327 ||||| || || ||||||||| || | || || |||||||||||||| || ||| Sbjct 12984 GTCAAGTCGAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAGCAGCGTCTCATCTTC 13043 Query 31328 GCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAAGAATCG 31387 || ||||| ||| | || ||| || || ||| || ||||| || || || ||| Sbjct 13044 GCCGGCAAGCAGCTCGAGGACGGCCGCACCCTGTCCGACTACAACATCCAGAAGGAGTCG 13103 Query 31388 ACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || || || || || ||| | ||| | || |||| Sbjct 13104 ACGCTCCACCTCGTCCTTCGCCTGCGTGGTGGTA 13137 >seq2 Length=3829864 Score = 98.7 bits (108), Expect = 9e-16 Identities = 114/151 (75%), Gaps = 2/151 (1%) Strand=Plus/Plus Query 57975 CTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTC-GGGCAGCTTTGCGGCAATATT 58033 || || ||||| ||| || || || || |||||||| |||| | ||||| ||||| || Sbjct 2322263 CTGATTGCGTTTGCCTGTGTGGAGGGCATCTTCTTTTCTGGGCCG-TTTGCTGCAATCTT 2322321 Query 58034 TTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCG 58093 |||| | ||||| |||||||| |||| || || |||||| |||||| | || || Sbjct 2322322 TTGGCTCAAGAAGCGCGGCCTCATGCGTGGTCTTACGTTTTCAAACGAGCTCATCAGCCG 2322381 Query 58094 CGACGAGGGTCTCCATACTGATTTTGCGTGC 58124 ||||||||| |||||| || ||||||||| Sbjct 2322382 CGACGAGGGAACCCATACCGACTTTGCGTGC 2322412 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445766204977200