Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20guehoae_20[genbank_20GCA_5F001600415.1_202016- 03-01] 35 sequences; 33,698,914 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq18 116 5e-21 seq2 82.4 1e-10 >seq18 Length=639095 Score = 116 bits (128), Expect = 5e-21 Identities = 247/368 (67%), Gaps = 3/368 (1%) Strand=Plus/Minus Query 33582 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGT 33641 || || || ||| ||||||||||||||| | ||| | ||||| || || ||||| Sbjct 159625 CACGCAAAGTCGGTGTGCAGACCCTCGTCGCGCGAAATGAGCTCGTTGGAGAAGGTGAGG 159566 Query 33642 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAG 33701 || ||||| || || ||||| || |||||||| ||||| || || || |||||||||||| Sbjct 159565 CCCGGCATGAGACCGCGCTTCTTGAGCCAAAAGATGGACGCAAACGAGCCGGAAAAGAAG 159506 Query 33702 ATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCT---GTCATGT 33758 || || || || || ||||| ||||| || | ||| || | | | ||| Sbjct 159505 ATGCCCTCGACGGCCGCAAACGCAATCAGGCGCTCGGCAAAGGTAGACTTTTCGTCCGAA 159446 Query 33759 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 33818 ||||| | ||||| ||||||||||| || | || || ||||| || || || || Sbjct 159445 ATCCAGCGCAGCGCCCAGTCGGCCTTCTTCTTGATGCACGGGATCGTCTCAATCGCGTTG 159386 Query 33819 AAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATT 33878 || || || | | | || || || || ||||||| || ||| | Sbjct 159385 AACAGGTACGTCCGGCGCGCATTGTCGCGAATGTACGTGTCGATCAGGAGCGAGTACGTC 159326 Query 33879 TCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATC 33938 || || || ||||| || || ||||| || |||||||| | ||||||| |||| Sbjct 159325 TCAGAGTGGATGTTCTCCATCATAATCTGGAAGCCGTAGAATGTCTTGGCCTCGGCAATC 159266 Query 33939 TGCACTTC 33946 ||||| || Sbjct 159265 TGCACCTC 159258 >seq2 Length=3829864 Score = 82.4 bits (90), Expect = 1e-10 Identities = 95/128 (74%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 33603 CCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTT 33662 |||||||| | || || | ||||| |||||||| || || |||| ||||| ||||| Sbjct 2322390 CCCTCGTCGCGGCTGATGAGCTCGTTTGAAAACGTAAGACCACGCATGAGGCCGCGCTTC 2322331 Query 33663 TTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAG 33722 || |||||||| || | ||| || | || ||||||||||| || || || ||||| Sbjct 2322330 TTGAGCCAAAAGATTGCAGCAAACGGCCCAGAAAAGAAGATGCCCTCCACACAGGCAAAC 2322271 Query 33723 GCAATAAG 33730 ||||| || Sbjct 2322270 GCAATCAG 2322263 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629817324454800