Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20guehoae_20[genbank_20GCA_5F001600415.1_202016- 03-01] 35 sequences; 33,698,914 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq18 111 2e-19 >seq18 Length=639095 Score = 111 bits (122), Expect = 2e-19 Identities = 151/211 (72%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 139555 AACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTC 139614 ||| | ||||| ||| ||||| || || ||||| ||||| || ||||| ||| || Sbjct 12695 AACGAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAATCAGACAATGTGCGGCCGTCCTC 12636 Query 139615 GAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGT 139674 |||||| || || || | || ||||| ||||| |||||||| ||||| || ||||| Sbjct 12635 GAGCTGCTTTCCCGCGAAAATGAGACGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCCTG 12576 Query 139675 GATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTT 139734 ||| || || | | || | ||||||| | ||| ||||||| ||| | ||||| Sbjct 12575 GATCTTGCTCTTCACGTTGTCGATCGTGTCGGAAGACTCGACCTCAAGGGTGATGGTCTT 12516 Query 139735 GCCGGTCAACGTTTTTACGAATATTTGCATA 139765 |||||| | || || ||||| || |||||| Sbjct 12515 GCCGGTAAGGGTCTTGACGAAGATCTGCATA 12485 Score = 86.0 bits (94), Expect = 6e-12 Identities = 126/176 (72%), Gaps = 2/176 (1%) Strand=Plus/Plus Query 52598 ACGACAAAGCCACTTTTGCCGAACGTCTGGTCGCGTTTGCTATAGTGGAAGGTGTGtttt 52657 |||| || | || |||||||| || ||| | |||||||| || || || | || | Sbjct 159451 ACGAAAAGTCTACCTTTGCCGAGCGCCTGATTGCGTTTGCGGCCGTCGAGGGCATCTTCT 159510 Query 52658 tttCGGGTAGTTTTGCGGCAATATTTTACATCAA-AACCTTGGGCATAATGCCCGGCCTC 52716 |||| || |||||| | || |||| |||| || | || | | ||||| |||||| Sbjct 159511 TTTCCGGCTCGTTTGCGTCCATCTTTTGGCTCAAGAAGCGCGGTC-TCATGCCGGGCCTC 159569 Query 52717 ACGTTTAGCAACGAGTTGATATCGCGCGACGAAGGAATGCACACAGATTTTGCGTG 52772 || || ||||||| | || ||||||||||| || ||||||| || |||||||| Sbjct 159570 ACCTTCTCCAACGAGCTCATTTCGCGCGACGAGGGTCTGCACACCGACTTTGCGTG 159625 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496063782972000