Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20guehoae_20[genbank_20GCA_5F001600415.1_202016- 03-01] 35 sequences; 33,698,914 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq18 134 2e-26 seq2 98.7 1e-15 >seq18 Length=639095 Score = 134 bits (148), Expect = 2e-26 Identities = 281/417 (67%), Gaps = 5/417 (1%) Strand=Plus/Minus Query 49960 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 50019 || || || ||| ||||||||||||||| | ||| || |||||||| || ||||| Sbjct 159625 CACGCAAAGTCGGTGTGCAGACCCTCGTCGCGCGAAATGAGCTCGTTGGAGAAGGTGAGG 159566 Query 50020 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAG 50079 || ||||| || || ||||| || |||||||| ||||||||||| || || ||||||||| Sbjct 159565 CCCGGCATGAGACCGCGCTTCTTGAGCCAAAAGATGGACGCAAACGAGCCGGAAAAGAAG 159506 Query 50080 ATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCT---GTCATGT 50136 || || || || || ||||| |||| || | ||| || | | | | ||| Sbjct 159505 ATGCCCTCGACGGCCGCAAACGCAATCAGGCGCTCGGCAAAGGTAGACTTTTCGTCCGAA 159446 Query 50137 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 50196 ||||| | ||||| ||||||||||| || | || || ||||| || || || || Sbjct 159445 ATCCAGCGCAGCGCCCAGTCGGCCTTCTTCTTGATGCACGGGATCGTCTCAATCGCGTTG 159386 Query 50197 AAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATT 50256 || || || | | | || || || || ||||||| || ||| | Sbjct 159385 AACAGGTACGTCCGGCGCGCATTGTCGCGAATGTACGTGTCGATCAGGAGCGAGTACGTC 159326 Query 50257 TCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATC 50316 || || || ||||| || || ||||| || |||||||| | ||||||| |||| Sbjct 159325 TCAGAGTGGATGTTCTCCATCATAATCTGGAAGCCGTAGAATGTCTTGGCCTCGGCAATC 159266 Query 50317 TGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTC--ACTGG 50371 ||||| || || || || || | | ||||| || || || ||||| ||||| Sbjct 159265 TGCACCTCGCCGCAGAAGCGCTCGACAAGGTTTTCGTTGACAATGCCGTCGGACTGG 159209 >seq2 Length=3829864 Score = 98.7 bits (108), Expect = 1e-15 Identities = 96/124 (77%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 49981 CCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTT 50040 |||||||| | || || || ||||| |||||||| || || |||| ||||| ||||| Sbjct 2322390 CCCTCGTCGCGGCTGATGAGCTCGTTTGAAAACGTAAGACCACGCATGAGGCCGCGCTTC 2322331 Query 50041 TTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAG 50100 || |||||||| || | ||||| | ||||||||||||||| || || || |||||| Sbjct 2322330 TTGAGCCAAAAGATTGCAGCAAACGGCCCAGAAAAGAAGATGCCCTCCACACAGGCAAAC 2322271 Query 50101 GCAA 50104 |||| Sbjct 2322270 GCAA 2322267 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718268485757400