Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20guehoae_20[genbank_20GCA_5F001600415.1_202016- 03-01] 35 sequences; 33,698,914 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq18 129 8e-25 >seq18 Length=639095 Score = 129 bits (142), Expect = 8e-25 Identities = 281/418 (67%), Gaps = 7/418 (2%) Strand=Plus/Minus Query 42065 CATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGT 42124 || || || ||| |||||||||||| || | ||| | |||||||| || ||||| Sbjct 159625 CACGCAAAGTCGGTGTGCAGACCCTCGTCGCGCGAAATGAGCTCGTTGGAGAAGGTGAGG 159566 Query 42125 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAG 42184 || ||||| || || ||||| || |||||||| || |||||||| || || ||||||||| Sbjct 159565 CCCGGCATGAGACCGCGCTTCTTGAGCCAAAAGATGGACGCAAACGAGCCGGAAAAGAAG 159506 Query 42185 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACT----GTCATG 42240 || || || || |||||||| ||||| || | ||| || || ||| ||| Sbjct 159505 ATGCCCTCGACGGCCGCAAACGCAATCAGGCGCTCGGCA-AAGGTAGACTTTTCGTCCGA 159447 Query 42241 TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATT 42300 ||||| | ||||| ||||||||||| || | || || ||||| || || || || Sbjct 159446 AATCCAGCGCAGCGCCCAGTCGGCCTTCTTCTTGATGCACGGGATCGTCTCAATCGCGTT 159387 Query 42301 AAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACAT 42360 || || || | | | || || || || ||||||| || ||| | Sbjct 159386 GAACAGGTACGTCCGGCGCGCATTGTCGCGAATGTACGTGTCGATCAGGAGCGAGTACGT 159327 Query 42361 TTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAAC 42420 || || || ||||| || || ||||| || |||||||| ||||||||| || Sbjct 159326 CTCAGAGTGGATGTTCTCCATCATAATCTGGAAGCCGTAGAATGTCTTGGCCTCGGCAAT 159267 Query 42421 CTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTC--ACTGG 42476 ||| || || || || || || | | |||||||| || || ||||| ||||| Sbjct 159266 CTGCACCTCGCCGCAGAAGCGCTCGACAAGGTTTTCGTTGACAATGCCGTCGGACTGG 159209 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671138906376600