Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20guehoae_20[genbank_20GCA_5F001600415.1_202016- 03-01] 35 sequences; 33,698,914 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq18 228 1e-54 seq1 147 3e-30 seq15 87.8 3e-12 seq2 84.2 3e-11 >seq18 Length=639095 Score = 228 bits (252), Expect = 1e-54 Identities = 370/528 (70%), Gaps = 17/528 (3%) Strand=Plus/Plus Query 125235 TTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATT 125294 || ||||| ||||| || ||||| |||||| | ||||| || | |||||| ||||| Sbjct 159285 TTCTACGGCTTCCAGATTATGATGGAGAACATCCACTCTGAGACGTACTCGCTCCTGATC 159344 Query 125295 GACATGTACATTCGCGA---TCCGCAACGTAAACACATGCTCTTTAACGCAATCGACACG 125351 |||| |||||||||||| | ||| || | || || || ||||| || || ||| Sbjct 159345 GACACGTACATTCGCGACAATGCGCGCCGGACGTACCTGTTC---AACGCGATTGAGACG 159401 Query 125352 GTGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCT 125411 | |||| || || ||||| | |||| | | || ||||| ||||| |||||| Sbjct 159402 ATCCCGTGCATCAAGAAGAAGGCCGACTGGGCGCTGCGCTGGATTTCGGACGAAAAGTCT 159461 Query 125412 TCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGT 125471 | | ||||| | ||| | || || || ||||| ||||||||||||||||| || Sbjct 159462 ACCTTTGCCGAGCGCCTGATTGCGTTTGCGGCCGTCGAGGGCATCTTCTTTTCCGGCTCG 159521 Query 125472 TTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAAC 125531 |||||| ||||||||||||||||||||||||| |||||||| || || || | ||| Sbjct 159522 TTTGCGTCCATCTTTTGGCTCAAGAAGCGCGGTCTCATGCCGGGCCTCACCTTCTCCAAC 159581 Query 125532 GAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTTTCGCAAC 125591 ||| | || || || |||||||| || ||| |||||||| || || || || | Sbjct 159582 GAGCTCATTTCGCGCGACGAGGGTCTGCACACCGACTTTGCGTGCCTCCTCTT---CACC 159638 Query 125592 TATCTGC-GTCCCGAGTGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGC 125650 | |||| | ||| ||| || | || | | ||| ||| ||| | ||| || Sbjct 159639 CACCTGCAGCGCCGCCCGCA---CCCG----GACACGATCAACAAGATTATCCGCGAGGC 159691 Query 125651 CGTGAGGATAGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAA 125710 || | ||| || |||||||| || ||||| | || || || | ||||||||||| Sbjct 159692 GGTCAAGATTGAGCAAGAGTTCCTCACCGACGCGCTCCCCGTGTCGCTCATTGGCATGAA 159751 Query 125711 CTGCAAGCTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACT 125758 || ||||| |||||| ||||||| |||||||| || || || || || Sbjct 159752 CTCGAAGCTCATGTGCCAGTACATTGAGTTTGTCGCCGACCGCCTCCT 159799 >seq1 Length=3969531 Score = 147 bits (162), Expect = 3e-30 Identities = 354/532 (67%), Gaps = 8/532 (2%) Strand=Plus/Minus Query 96807 ACAAACGGCAACGCCAGTGGCCTAGTGCCAATGCTCAGAATGTACAATGCAATGTCACGA 96866 || |||||| || | | || | || || |||||| | ||| |||| | | | || Sbjct 1697024 ACCAACGGCTACTCGAACGGTATCGTCCCCATGCTCCGTGCCTACGATGCGACGGCCCGT 1696965 Query 96867 TACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGG 96926 ||||| ||||||||||| || || ||||| || | ||| ||||| | || || ||| Sbjct 1696964 TACGTCGACCAGGGCGGCAACAAGCGCCCAGGTGCCTTTGCCATCTACCTCGAGCCCTGG 1696905 Query 96927 CACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGA 96986 ||||| ||||| |||||||| |||| | ||||| ||| ||| || || | || Sbjct 1696904 CACGCCGACGTCTTTGACTTCCTCGACCTCCGCAAGAACCACGGCAAGGAGGAAGTCCGT 1696845 Query 96987 GCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTC---AAC 97043 || | ||| | || || || || ||| | || || ||||||||||||| ||| | Sbjct 1696844 GCTCGTGACCTCTTCTACGCGCTGTGGATCCCCGACCTGTTCATGAAGCGTGTCGAGATG 1696785 Query 97044 GACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGG 97103 ||||||| |||||| || |||||||||| | || ||||| || ||||| | Sbjct 1696784 GACGGTG---ACTGGACGCTCATGTGCCCCGCCGAGTGCCCCGGCCTCGCCGATGTCCAC 1696728 Query 97104 GGCGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGC-CGATACGTGAGACG 97162 || || || |||| ||| | |||||||| | ||| | || ||||| Sbjct 1696727 TCGGAGGAATTCGAGGAGCTCTACCTGAGCTACGAGCGTGCCGGCAAGGGCCGCAAGACG 1696668 Query 97163 AGTCGATGCACGAGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCC 97222 | || | || | | | || ||| ||||| | ||||||| |||||||| ||| Sbjct 1696667 A-TCAAGGCGCAAAAGCTCTGGTTTGCCATTCTCGAGGCTCAGACTGAGACTGGCGGTCC 1696609 Query 97223 GTACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCAT 97282 | ||| ||||||||||| | | || |||| ||||| | ||| | ||||| || Sbjct 1696608 CTTCATGCTCTACAAGGACGCGGCCAACAGCAAGTCGAACCAGCAGCACCTCGGCACGAT 1696549 Query 97283 CAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAG 97334 |||| ||||| || ||||| || || | |||||| | || || |||||| Sbjct 1696548 CAAGTCGTCCAACCTCTGCACTGAGATCATCGAGTACTCGTCGCCCGACGAG 1696497 >seq15 Length=1061524 Score = 87.8 bits (96), Expect = 3e-12 Identities = 113/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 70300 CAAATTGTCATGCTTAATGTATCAGAGGAGTGCCGACATGGGCCTCGGTGTACCCTTTAA 70359 |||| |||| ||| | ||||| ||| | || |||| | |||||||| || ||||| || Sbjct 581777 CAAACTGTCGTGCCTCATGTACCAGCGCAGCTGCGACCTCGGCCTCGGCGTGCCCTTCAA 581718 Query 70360 CATTGCAAGCTATTCTATGTTGACGCACATGATTGCTCACATTACCGGCCTGAAAGCGCA 70419 |||||| |||||| | | | || ||||||||||| | | | || ||| | || || Sbjct 581717 CATTGCGAGCTATGCGCTCCTCACCCACATGATTGCCCTCGTCACGGGCACCGAGGCACA 581658 Query 70420 CGAGTTCGTACACACCATTGGCGACGCTCACGTGTA 70455 |||||| || | | || |||||||| || ||||| Sbjct 581657 CGAGTTTGTCCTCCAGATGGGCGACGCGCATGTGTA 581622 >seq2 Length=3829864 Score = 84.2 bits (92), Expect = 3e-11 Identities = 76/96 (79%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 125427 CTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTT 125486 ||| | || || ||| || ||||||||||||||||| || ||||| || |||||| Sbjct 2322263 CTGATTGCGTTTGCCTGTGTGGAGGGCATCTTCTTTTCTGGGCCGTTTGCTGCAATCTTT 2322322 Query 125487 TGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACG 125522 ||||||||||||||||| ||||||| || || ||| Sbjct 2322323 TGGCTCAAGAAGCGCGGCCTCATGCGTGGTCTTACG 2322358 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741058875786600