Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20guehoae_20[genbank_20GCA_5F001600415.1_202016- 03-01] 35 sequences; 33,698,914 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq18 122 1e-22 seq2 91.5 2e-13 >seq18 Length=639095 Score = 122 bits (134), Expect = 1e-22 Identities = 278/417 (67%), Gaps = 5/417 (1%) Strand=Plus/Minus Query 33304 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 33363 || || || ||| ||||||||||||||| | ||| || |||||||| || ||||| Sbjct 159625 CACGCAAAGTCGGTGTGCAGACCCTCGTCGCGCGAAATGAGCTCGTTGGAGAAGGTGAGG 159566 Query 33364 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAG 33423 || ||||| || || ||||| || |||||||| ||||| || || || || ||||||||| Sbjct 159565 CCCGGCATGAGACCGCGCTTCTTGAGCCAAAAGATGGACGCAAACGAGCCGGAAAAGAAG 159506 Query 33424 ATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCT---GTCATGT 33480 || || || || || ||||| ||||| || | ||| || | | | ||| Sbjct 159505 ATGCCCTCGACGGCCGCAAACGCAATCAGGCGCTCGGCAAAGGTAGACTTTTCGTCCGAA 159446 Query 33481 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 33540 ||||| | ||||| ||||||||||| || | || || ||||| || || || || Sbjct 159445 ATCCAGCGCAGCGCCCAGTCGGCCTTCTTCTTGATGCACGGGATCGTCTCAATCGCGTTG 159386 Query 33541 AAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATT 33600 || || || | | | || || || || ||||||| || ||| | Sbjct 159385 AACAGGTACGTCCGGCGCGCATTGTCGCGAATGTACGTGTCGATCAGGAGCGAGTACGTC 159326 Query 33601 TCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATC 33660 || || || ||||| || || ||||| || |||||||| | ||||||| |||| Sbjct 159325 TCAGAGTGGATGTTCTCCATCATAATCTGGAAGCCGTAGAATGTCTTGGCCTCGGCAATC 159266 Query 33661 TGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTC--ACTGG 33715 || || || || || || || | | ||||| || || || ||||| ||||| Sbjct 159265 TGCACCTCGCCGCAGAAGCGCTCGACAAGGTTTTCGTTGACAATGCCGTCGGACTGG 159209 >seq2 Length=3829864 Score = 91.5 bits (100), Expect = 2e-13 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 33325 CCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTT 33384 |||||||| | || || || ||||| |||||||| || || |||| ||||| ||||| Sbjct 2322390 CCCTCGTCGCGGCTGATGAGCTCGTTTGAAAACGTAAGACCACGCATGAGGCCGCGCTTC 2322331 Query 33385 TTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAG 33444 || |||||||| || | ||| || | |||||||||||||| || || || ||||| Sbjct 2322330 TTGAGCCAAAAGATTGCAGCAAACGGCCCAGAAAAGAAGATGCCCTCCACACAGGCAAAC 2322271 Query 33445 GCAATAAG 33452 ||||| || Sbjct 2322270 GCAATCAG 2322263 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622946927460600