Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20guehoae_20[genbank_20GCA_5F001600415.1_202016- 03-01] 35 sequences; 33,698,914 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq18 150 2e-31 seq3 96.9 3e-15 seq1 84.2 2e-11 seq2 82.4 7e-11 >seq18 Length=639095 Score = 150 bits (166), Expect = 2e-31 Identities = 362/532 (68%), Gaps = 17/532 (3%) Strand=Plus/Plus Query 46063 CTGCTTAATGCGTTTGA-ACGTATGCCGTGCGTGCGCAAGAAAACCGACTGGGCGATGAA 46121 ||| | || ||| |||| ||| || |||||| | ||||| ||||||||||| || Sbjct 159381 CTGTTCAACGCGATTGAGACG-ATCCCGTGCATCAAGAAGAAGGCCGACTGGGCGCTGCG 159439 Query 46122 GTGGATCAACAGCAGCACCG-CGACTTTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGG 46180 ||||| | | | | | | || || |||||||| || | || |||||| || | Sbjct 159440 CTGGATTT-CGGACGAAAAGTCTACCTTTGCCGAGCGCCTGATTGCGTTTGCGGCCGTCG 159498 Query 46181 AGGGCGTCtttttttCTGGCAGTTTTGCCGCCATCTTTTACATCAA-AACCAAGGGCATC 46239 ||||| |||| ||||| ||| ||||| ||||||||| |||| || | || | || Sbjct 159499 AGGGCATCTTCTTTTCCGGCTCGTTTGCGTCCATCTTTTGGCTCAAGAAGCGCGGTC-TC 159557 Query 46240 ATGCCCGGCCTGACGTTTAGCAACGAGCTGATATCGCGCGACGAGGGCCTGCATACGGAC 46299 ||||| ||||| || || ||||||||| || |||||||||||||| ||||| || ||| Sbjct 159558 ATGCCGGGCCTCACCTTCTCCAACGAGCTCATTTCGCGCGACGAGGGTCTGCACACCGAC 159617 Query 46300 TTTGCGTGTCTCTACTATAACACTCGCGTGCA-CGACAAGCTTGCGCCC-GACACCGTGC 46357 |||||||| ||| || ||| | | |||| || | || || ||| ||||| | Sbjct 159618 TTTGCGTGCCTCCTCT---TCACCCACCTGCAGCGCC--GCCCGCACCCGGACACGATCA 159672 Query 46358 TGAGCATGTTCAAGGAGGCGGTGGCCATTGAGAAGGAGTTTTTTACGGCCGCACTGCCCG 46417 | || || |||||||| |||||| | ||||| | || | ||| || |||| Sbjct 159673 ACAAGATTATCCGCGAGGCGGTCAAGATTGAGCAAGAGTTCCTCACCGACGCGCTCCCCG 159732 Query 46418 CTGCCCTGCTGGGCATGAACGCACAGTCAATGTGCGACTACATCGAGTTTGTAGCGGACC 46477 | || | ||||||||| | || |||||| | ||||| |||||||| || |||| Sbjct 159733 TGTCGCTCATTGGCATGAACTCGAAGCTCATGTGCCAGTACATTGAGTTTGTCGCCGACC 159792 Query 46478 GACTGCTCGTGCAGCTTCACCA--GCCGAAGCATTTTCACGCGCGCAATCCATTTGAGTT 46535 | || ||||| | | || || | | ||| || || | || || || || || Sbjct 159793 GCCTCCTCGT-CGCCCTCGGCAATGAC-AAGATTTGGAACTCTGCAAACCCCTTCGACTT 159850 Query 46536 TATGAACAACATCTCCCTGGAGGGCAAAACTAATTTTTTCGAAAAGCGCGTC 46587 |||| | | || ||||| ||||||| | || |||||||| ||||||| Sbjct 159851 TATGGAGATGATTTCCCTCCAGGGCAAGGCAAACTTTTTCGAGTCGCGCGTC 159902 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| || || || | || | ||||||||||| || ||||||||||| | Sbjct 12712 CCACCACGCAGGCGGAGAACGAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAATCAGAC 12653 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| |||||| |||||||| || ||| | || | |||||||||||| ||||| Sbjct 12652 AATGTGCGGCCGTCCTCGAGCTGCTTTCCCGCGAAAATGAGACGCTGCTGGTCGGGAGGA 12593 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||| | | || | || |||| ||||||| Sbjct 12592 ATGCCCTCCTTGTCCTGGATCTTGCTCTTCACGTTGTCGATCGTGTCGGAAGACTCGACC 12533 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | ||| || ||||| || || || ||||| |||||||| Sbjct 12532 TCAAGGGTGATGGTCTTGCCGGTAAGGGTCTTGACGAAGATCTGCAT 12486 Score = 122 bits (134), Expect = 8e-23 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| || || || | || | ||||||||||| || |||||||| ||| | Sbjct 13135 CCACCACGCAGGCGAAGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAC 13076 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| |||||| ||||||||||| ||| |||| | ||||||||||||||| ||| Sbjct 13075 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGGGGG 13016 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| ||| ||||| | || | || || | ||||||| Sbjct 13015 ATACCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCAATCGTGTCCGACGACTCGACC 12956 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTT 131219 |||| ||| | || || || || || || || Sbjct 12955 TCGAGGGTGATCGTCTTTCCCGTGAGCGTCTT 12924 >seq3 Length=2791342 Score = 96.9 bits (106), Expect = 3e-15 Identities = 109/145 (75%), Gaps = 2/145 (1%) Strand=Plus/Minus Query 130997 TTCACCATGAGCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGT 131056 ||| ||||| ||||| || | || || || | || | |||||||||||| || |||| Sbjct 1929968 TTCGCCATG--CCACCACGAAGGCGGAGGACAAGGTGAAGGGTCGACTCCTTCTGGATGT 1929911 Query 131057 TGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCT 131116 |||| || | |||||| |||||| ||||||||||| ||| |||| | ||||||| Sbjct 1929910 TGTAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCT 1929851 Query 131117 GGTCCGGAGGGATTCCTTCTTTGTC 131141 |||| || ||||| || || ||||| Sbjct 1929850 GGTCGGGGGGGATGCCCTCCTTGTC 1929826 >seq1 Length=3969531 Score = 84.2 bits (92), Expect = 2e-11 Identities = 105/144 (73%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 131070 GGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGAT 131129 |||||| |||||| ||||||||||| ||| |||| | |||||||||||| || ||||| Sbjct 1130120 GGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGGGAT 1130179 Query 131130 TCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTC 131189 || || ||||| ||| || ||||| | || | || || | |||||||| || Sbjct 1130180 GCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATCGTGTCCGAGGACTCGACCTC 1130239 Query 131190 GACGGTAACGGTTTTACCGGTTAG 131213 || ||| | ||| || || || || Sbjct 1130240 GAGGGTGATGGTCTTGCCCGTGAG 1130263 >seq2 Length=3829864 Score = 82.4 bits (90), Expect = 7e-11 Identities = 104/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 46165 GCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTTTGCCGCCATCTTTTACATC 46224 || ||||| |||||||||| |||| |||||||| ||||| || ||||||| || Sbjct 2322269 GCGTTTGCCTGTGTGGAGGGCATCTTCTTTTCTGGGCCGTTTGCTGCAATCTTTTGGCTC 2322328 Query 46225 AAAACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACGAGCTGATATCGCGCGACGAG 46284 || | ||| |||||| || || |||||| |||||||| || ||||||||| Sbjct 2322329 AAGAAGCGCGGCCTCATGCGTGGTCTTACGTTTTCAAACGAGCTCATCAGCCGCGACGAG 2322388 Query 46285 GGCCTGCATACGGACTTTGCGTG 46307 || ||||| ||||||||||| Sbjct 2322389 GGAACCCATACCGACTTTGCGTG 2322411 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472012593494400