Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20guehoae_20[genbank_20GCA_5F001600415.1_202016- 03-01] 35 sequences; 33,698,914 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq18 140 4e-28 >seq18 Length=639095 Score = 140 bits (154), Expect = 4e-28 Identities = 284/417 (68%), Gaps = 6/417 (1%) Strand=Plus/Minus Query 93091 GCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAA 93150 ||||||||||||||| || | ||| ||||| || || || | ||| ||| ||| || | Sbjct 159626 GCACGCAAAGTCGGTGTGCAGACCCTCGTCGCGCGAAATGAGCTCGTTGGAGAAGGTGAG 159567 Query 93151 ACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaa 93210 || || | || || || |||||||||||||| || || ||||| || ||||| || Sbjct 159566 GCCCGGCATGAGACCGCGCTTCTTGAGCCAAAAGATGGACGCAAACGAGCCGGAAAAGAA 159507 Query 93211 TATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCT 93270 || || || ||||| ||||| || | | || |||||||| | | || | | Sbjct 159506 GATGCCCTCGACGGCCGCAAACGCAATCAGGCGCTCGGCAAAGGT--AGACTTTTCGTCC 159449 Query 93271 G--ATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCG 93328 | ||||| | ||||| ||||| || ||||| || || || | || || || ||| Sbjct 159448 GAAATCCAGCGCAGCGCCCAGTCGGCCTTCTTCTTGATGCACGGGATCGTCTCAATCGCG 159389 Query 93329 TTAAATAGGTA-ATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATA 93387 || || ||||| || || || | || || ||||| || ||||| | || || || Sbjct 159388 TTGAACAGGTACGTCCGGCGCG-CATTGTCGCGAATGTACGTGTCGATCAGGAGCGAGTA 159330 Query 93388 CATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGT 93447 | | ||||| |||| |||||||| ||| ||||| |||||||| | || || | Sbjct 159329 CGTCTCAGAGTGGATGTTCTCCATCATAATCTGGAAGCCGTAGAATGTCTTGGCCTCGGC 159270 Query 93448 GATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGA 93504 |||||||| || | || | ||| || || ||||| ||||| || || ||||| Sbjct 159269 AATCTGCACCTCGCCGCAGAAGCGCTCGACAAGGTTTTCGTTGACAATGCCGTCGGA 159213 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556860556373400