Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20guehoae_20[genbank_20GCA_5F001600415.1_202016- 03-01] 35 sequences; 33,698,914 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq18 91.5 1e-13 seq3 89.7 4e-13 >seq18 Length=639095 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | ||||| || || |||| ||||| || || | || Sbjct 12486 ATGCAGATCTTCGTCAAGACCCTTACCGGCAAGACCATCACCCTTGAGGTCGAGTCTTCC 12545 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | | || || || || ||||||||||| ||||| ||||| || Sbjct 12546 GACACGATCGACAACGTGAAGAGCAAGATCCAGGACAAGGAGGGCATTCCTCCCGACCAG 12605 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || || || || ||| | ||||| |||||| | || ||||||||| Sbjct 12606 CAGCGTCTCATTTTCGCGGGAAAGCAGCTCGAGGACGGCCGCACATTGTCTGATTACAAC 12665 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || || || || | || | ||| | || |||| || ||| Sbjct 12666 ATCCAGAAGGAGTCGACGCTTCACCTCGTTCTCCGCCTGCGTGGTGGT 12713 Score = 89.7 bits (98), Expect = 4e-13 Identities = 112/154 (73%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 ||||| || || |||||||||| || || || | || ||| | ||| | |||| Sbjct 12232 ACCGGCAAGACCATCACTCTTGAGGTCGAGTCCTCGGACACCATCGACAACGTCAAGTCG 12291 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || ||||| ||||||||||| ||||| ||||| || || || || || || |||||||| Sbjct 12292 AAGATTCAGGACAAGGAGGGCATTCCCCCCGACCAGCAGCGCCTCATCTTCGCCGGCAAG 12351 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396 ||| | ||||| |||||| | || || |||| Sbjct 12352 CAGCTCGAGGACGGTCGCACCCTTTCGGACTACA 12385 Score = 87.8 bits (96), Expect = 2e-12 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || |||||||||||||| || || || || || ||||| || || |||||||| Sbjct 12993 AAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAGCAGCGTCTCATCTTCGCCGGCAAG 13052 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415 ||| | ||||| ||||||| | ||||| |||||||| || || || || || Sbjct 13053 CAGCTCGAGGACGGCCGCACCCTGTCCGACTACAACATCCAGAAGGAGTCGAC 13105 Score = 84.2 bits (92), Expect = 2e-11 Identities = 111/154 (72%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 || || || || |||| ||||| || || || | || ||| | ||| | |||| Sbjct 11910 ACTGGCAAGACCATCACCCTTGAGGTCGAGTCCTCGGACACCATCGACAACGTCAAGTCG 11969 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || ||||||||||| ||||| ||||| || || || ||||| || |||||||| Sbjct 11970 AAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAGCAGCGCCTTATCTTCGCCGGCAAG 12029 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396 ||| | ||||| ||||||| | || || |||| Sbjct 12030 CAGCTCGAGGACGGCCGCACCCTTTCGGACTACA 12063 >seq3 Length=2791342 Score = 89.7 bits (98), Expect = 4e-13 Identities = 124/174 (71%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 || || || || |||| ||||| ||||| | | || ||| | ||| | |||| Sbjct 1929757 ACGGGCAAGACCATCACCCTTGAGGTGGAGTCTTCGGACACCATCGACAACGTCAAGTCC 1929816 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || ||||||||||| || || ||||| || || || || || || |||||||| Sbjct 1929817 AAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAGCAGCGCCTCATCTTCGCCGGCAAG 1929876 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACC 22416 ||| | ||||| ||||||| | || || |||||||| || || || || ||| Sbjct 1929877 CAGCTCGAGGACGGCCGCACCCTTTCGGACTACAACATCCAGAAGGAGTCGACC 1929930 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419727820959775