Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20guehoae_20[genbank_20GCA_5F001600415.1_202016- 03-01] 35 sequences; 33,698,914 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq4 167 5e-36 seq5 120 6e-22 seq18 118 2e-21 seq19 102 2e-16 >seq4 Length=2444010 Score = 167 bits (184), Expect = 5e-36 Identities = 344/510 (67%), Gaps = 9/510 (2%) Strand=Plus/Plus Query 218503 AACATCCCCGTCCCTGACTTCATCGACAAGGAGCTCATTCTTTTCTCGCGGTATGATGTG 218562 || |||||| || | ||||| || |||||||||||||||| ||||| | ||| Sbjct 743819 AAGATCCCCATCGCGGACTTTGTCAACAAGGAGCTCATTCTCTTCTCCATGGCTGACAAC 743878 Query 218563 GAGCGTTCTATTCCCAGCGTGGTGGATGGCCTCAAGCCATCGCAGCGTAAGATCCTCTTT 218622 ||| || ||||| || | || || |||||||| ||||| ||| || | ||| Sbjct 743879 ATGCGCTCCATTCCGTCAGTTGCCGACGGTCTCAAGCCTGGCCAGCGCAAGGTCATGTTT 743938 Query 218623 GCCGCATTCAAGCGGAACCTGGTTCAAGAA----ATTAAGGTCGCTCAGTTTTCTGGTTA 218678 | |||||||| || || |||||| || ||||| || ||| | ||||||| Sbjct 743939 GGTTGCTTCAAGCGCAATCT----CAAGAAGGAGATCAAGGTTGCACAGCTCGCTGGTTA 743994 Query 218679 TGTATCCGAAATTTCTGGCTACCATCACGGTGAGCAGAGTCTGCAGGGTGCCATTGTAGG 218738 ||||| ||| |||| ||||| ||||||||| | |||||| || | ||||| || Sbjct 743995 CGTATCGGAACACACTGGGTACCACCACGGTGAGGTGTCCCTGCAGAGTACGATTGTCGG 744054 Query 218739 CATGGCACAGGACTATGTGGGCAGTAACAACATGAACTTGCTGCTCCCCAACGGTCAGTT 218798 | |||| || ||| ||| ||||| |||||||| |||||||| |||||||||||| || Sbjct 744055 CCTGGCGCAAAACTTTGTTGGCAGCAACAACATCAACTTGCTCTCCCCCAACGGTCAATT 744114 Query 218799 TGGTTCTCGTCTATTGGGTGGAAAGGATAGTGCTTCTGCCAGGTATATCTTTACAAAGTT 218858 || ||||||| || || ||||| ||| ||| | ||||| || ||| | Sbjct 744115 CGGAACTCGTCTGCAAGGCGGCAAGGACGCTGCGAGCGCCCGTTATATTTTCACAGCCAT 744174 Query 218859 GTCGCCCGTGACGCGCCAGGTGTTCAATCAGGCCGATGATGTGCTCCTTAAGTATCTTGA 218918 | | | ||||||| | ||| ||| || || || | ||| | | ||||| Sbjct 744175 CCCTCGCATGACGCGTACACTTTTCCATCCTGCGGACGACGCGCTGTTGACCTATCTCAC 744234 Query 218919 GGACGATGGTTCTTCGATTGAGCCCGAGTGGTATGTGCCTGCTATTCCGTTTTTGCTCGT 218978 || ||||| ||| |||||||||| ||| | || | | ||| || | ||| | Sbjct 744235 CGAAGATGGGCAAAAGATCGAGCCCGAGTACTATCTCCCAACCGTGCCGCTTGTCCTCAT 744294 Query 218979 AAATGGTGCCAATGGTATCGGGACAGGGTT 219008 || |||||| ||||||| || || ||||| Sbjct 744295 CAACGGTGCCGATGGTATTGGTAC-GGGTT 744323 >seq5 Length=2250089 Score = 120 bits (132), Expect = 6e-22 Identities = 137/182 (75%), Gaps = 3/182 (2%) Strand=Plus/Minus Query 280179 GGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAGACCCAGGCC 280238 || ||||| ||| |||| ||||| ||||| |||| |||| ||||||||||| || || Sbjct 328945 GGCCCCAACGGTTCGGGCAAGTCGACCCTCGTCAAGCTCCTTACTGGCGAGACTGAGCCC 328886 Query 280239 A--CTGAGGGGT-CCGTTTGGAAGCATCCCAACATGCGGATGGCTTACGTCGCTCAGCAC 280295 | || | ||| |||| |||||||| || ||| | || | ||||| || |||||| Sbjct 328885 AACCTTGGCGGTACCGTCTGGAAGCACCCGAACCTTGTCATTGGCTACGTGGCCCAGCAC 328826 Query 280296 GCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAGTGGCGC 280355 |||||||||||||| || | ||||| |||| ||||||| | | ||||| | |||||| Sbjct 328825 GCTTTCCACCACATTGACCAGCACCTTGACAAGACTCCTCTCGAGTACATGCTCTGGCGC 328766 Query 280356 TA 280357 || Sbjct 328765 TA 328764 Score = 91.5 bits (100), Expect = 3e-13 Identities = 124/172 (72%), Gaps = 1/172 (1%) Strand=Plus/Minus Query 280708 CTCGCATTCGCGGTCTTTCTGGAGGCCAGAAGGTCAAACTTGTCATCGGAGCAGCTCTGT 280767 |||| || |||||||| || || |||||||||||||| | || |||| || || | Sbjct 328397 CTCG-ATGCGCGGTCTCTCGGGTGGCCAGAAGGTCAAGATCGTTCTCGGTGCCGCCACCT 328339 Query 280768 GGCAACACCCTCACGTGATCGTTCTCGACGAGCCTACCAACTATCTGGACCGCGAGAGCC 280827 ||| | ||| ||| | ||| |||||||||||| |||||||| || ||||||||| | Sbjct 328338 GGCGTCGCCCCCACATTATCTGTCTCGACGAGCCCACCAACTACCTCGACCGCGAGTCGC 328279 Query 280828 TGGGCGCTCTGAGTGCTGCTCTGGACACATTTGGCGGCGGCGTCGTAGTCAT 280879 | | |||||| | || || || | | |||| ||||| || | ||||| Sbjct 328278 TCGCCGCTCTCATCGCCGCGCTCAAGAACTTTGAGGGCGGAGTGTTGGTCAT 328227 >seq18 Length=639095 Score = 118 bits (130), Expect = 2e-21 Identities = 385/584 (66%), Gaps = 13/584 (2%) Strand=Plus/Minus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 ||||| || || | |||||||| || || || | |||||| |||||||||||||||| Sbjct 159892 TCGAAAAAGTTTGCCTTGCCCTGGAGGGAAATCATCTCCATAAAGTCGAAGGGGTTTGCA 159833 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682 | || | |||| || ||| || || |||| || |||||| || |||||||| | Sbjct 159832 GAGTTCCAAATCTTGTCATTGCCGAGGGCGACGAGGAGGCGGTCGGCGACAAACTCAATG 159773 Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACA-AGGAATTGCCTCACAGAT 251741 ||||| | ||| || | |||||||||||||| | ||||| || | || || || Sbjct 159772 TACTGGCACATGAGCTTCGAGTTCATGCCAATGA-GCGACACGGGGAGCGCGTCGGTGAG 159714 Query 251742 GAATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCA-CCTGTGCCAGAGACA 251800 ||| || | || | || ||||| | ||| || | | ||| || | | Sbjct 159713 GAACTCTTGCTCAATCTTGACCGCCTCGCGGATAATCTTGTTGATCGTGT-CCGGGTGCG 159655 Query 251801 GCTTGTTCTCCAGCTTTGAGTACAGGA-GCTCGCCAAACTGTTGGTGCAGACCCTCGTCG 251859 | | || ||| | | | | |||| || || |||| | |||||||||||||||| Sbjct 159654 GGCGGCGCTGCAGGTGGGTGAAGAGGAGGCACG-CAAAGTCGGTGTGCAGACCCTCGTCG 159596 Query 251860 CGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCCAG 251919 || |||| ||||||||| | ||||| ||||| | || || ||| ||||||| Sbjct 159595 CGCGAAATGAGCTCGTTGGAGAAGGTGAGGCCCGGCATGAGACCGCGCTTCTTGAGCCAA 159536 Query 251920 AAGATTG-CGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCATGCAACAAG 251978 ||||| | ||| ||| || || || || | | |||||||| | | | |||| || Sbjct 159535 AAGATGGACGC-AAACGAGCCGGAAAAGAAGATGCCCTCGACGGCCGCAAACGCAATCAG 159477 Query 251979 GCGCTCAGCAAA---CGACTTGTCCTGCGACAAGAACTTCTGTGCCCATGCTGCCTTCTT 252035 |||||| ||||| ||||| || | ||| | | | | ||||| | |||||||| Sbjct 159476 GCGCTCGGCAAAGGTAGACTTTTCGTCCGAAATCCAGCGCAGCGCCCAGTCGGCCTTCTT 159417 Query 252036 -TCCAACCGCGGGGATTGTTTCGATTGCATCAAAGAGAGAGTTCCGCTCGGCATCGTCCT 252094 | | | | ||||| || || || || | || || | |||| |||| ||| Sbjct 159416 CTTGATGCAC-GGGATCGTCTCAATCGCGTTGAACAGGTACGTCCGGCGCGCATTGTCGC 159358 Query 252095 CGATGAGCGCATCAAGCAGGAGAGAGTACATCTCCGAATGGATG 252138 ||| || || | |||||| |||||| |||| || |||||| Sbjct 159357 GAATGTACGTGTCGATCAGGAGCGAGTACGTCTCAGAGTGGATG 159314 >seq19 Length=579500 Score = 102 bits (112), Expect = 2e-16 Identities = 177/257 (69%), Gaps = 3/257 (1%) Strand=Plus/Minus Query 279702 TCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGCGTGCC 279761 || || ||||||||||||||||||||||| | || | || ||||| || | ||||| Sbjct 462939 TCGCTCTCGGGTGGTTGGAAGATGAAGCTCGAGCTTGCGCGTGCCATGCTTATCGGTGCC 462880 Query 279762 GATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGGCTA 279821 || | || || || || || || ||||||||| | ||| | | || || ||||| Sbjct 462879 GACATTCTGCTCCTCGACGAACCGACCAACCACCTCGACGTCCAGACTGTTGCTTGGCTC 462820 Query 279822 GTGTCCTACCTAACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCTCTCACGACTCTGGC 279881 | |||||| || || | || | | ||| |||||||| |||||||||||| Sbjct 462819 GAAAACTACCTCGTCAACCTCCCCGACATTACCTGCCTGATTGTCTCGCACGACTCTGGC 462760 Query 279882 TTCCTAGATGCCGTGTGCTCTGCCATCATTCACTATGAGCAAAATCTGAAGCTCTCCAAG 279941 ||||| || || ||| | | ||| || ||||| ||| | || ||||||| | | Sbjct 462759 TTCCTTGACAATGTCTGCACGGACATTATCCACTACGAGAACAA---GAAGCTCGCATAC 462703 Query 279942 CACATCGGCAACCTGTC 279958 ||| ||||||||||| Sbjct 462702 TACAAGGGCAACCTGTC 462686 Score = 100 bits (110), Expect = 6e-16 Identities = 135/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 280170 GGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAG 280229 ||||| | || ||||| ||||| || ||||| || || ||||| | || ||||||||| Sbjct 462471 GGTGTTCTCGGCCCCAACGGTGCCGGCAAGTCGACGCTCATCAAGTTACTCACTGGCGAG 462412 Query 280230 ACCCAGGCCACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGCTTACGTCGCT 280289 || || ||||| |||| ||||| ||| |||| | | |||||||| Sbjct 462411 ACTGTCCCCCAGGAGGGCACCGTGCACAAGCACCCCGCGCTGCGTGTCGGCTACGTCGCG 462352 Query 280290 CAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAG 280349 |||||||| |||||||||||| | | ||||| |||| |||| | ||| ||||| ||| Sbjct 462351 CAGCACGCGTTCCACCACATCAACCAGCACCTCGACAAGACTGCCGTCCAGTACATCCAG 462292 Query 280350 TGGCGCTA 280357 ||||| || Sbjct 462291 TGGCGTTA 462284 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027836339079435