Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20guehoae_20[genbank_20GCA_5F001600415.1_202016- 03-01] 35 sequences; 33,698,914 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq18 113 1e-19 >seq18 Length=639095 Score = 113 bits (124), Expect = 1e-19 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | ||| ||||| || | ||| || || ||||| || ||||||| Sbjct 13135 CCACCACGCAGGCGAAGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAC 13076 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || || || |||||||| |||||||| || ||| Sbjct 13075 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGGGGG 13016 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| |||| || ||||| || || | || ||| || || Sbjct 13015 ATACCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCAATCGTGTCCGACGACTCGACC 12956 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458 ||||| ||||||||||| || || || ||||| Sbjct 12955 TCGAGGGTGATCGTCTTTCCCGTGAGCGTCTT 12924 Score = 111 bits (122), Expect = 4e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || ||||| |||| ||| || || ||||| || || || | Sbjct 12712 CCACCACGCAGGCGGAGAACGAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAATCAGAC 12653 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | ||||| ||||| || | || ||||| ||||| || |||||||| || || Sbjct 12652 AATGTGCGGCCGTCCTCGAGCTGCTTTCCCGCGAAAATGAGACGCTGCTGGTCGGGAGGA 12593 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 || || || || |||||||| || ||| |||||||| || || | ||| || || || Sbjct 12592 ATGCCCTCCTTGTCCTGGATCTT-GCTCTTCACGTTGTCGATCGTGTCGGAAGACTCGAC 12534 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| ||||| ||||| || ||||||||||| |||||||| Sbjct 12533 CTCAAGGGTGATGGTCTTGCCGGTAAGGGTCTTGACGAAGATCTGCAT 12486 Score = 86.0 bits (94), Expect = 1e-11 Identities = 85/110 (77%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 ||||| || || || |||||||| |||| || ||||| || || | || ||| || Sbjct 12823 GGGATACCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCAATCGTGTCCGACGACTCG 12764 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| ||||||||||| || || || ||||||||||| |||||||| Sbjct 12763 ACCTCGAGGGTGATCGTCTTTCCCGTGAGCGTCTTGACGAAGATCTGCAT 12714 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179653870998730