Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20guehoae_20[genbank_20GCA_5F001600415.1_202016- 03-01] 35 sequences; 33,698,914 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq18 102 2e-16 seq4 91.5 3e-13 >seq18 Length=639095 Score = 102 bits (112), Expect = 2e-16 Identities = 116/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 243561 GCTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCAT 243620 ||| |||||||||||||| | |||||| | |||||||| || || || ||||||||| | Sbjct 159737 GCTCATTGGCATGAACTCGAAGCTCATGTGCCAGTACATTGAGTTTGTCGCCGACCGCCT 159796 Query 243621 TTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGA 243680 || |||| || || |||| || | | ||||| |||||||| | ||||||||| Sbjct 159797 CCTCGTCGCCCTCGGCAATGACAAGATTTGGAACTCTGCAAACCCCTTCGACTTTATGGA 159856 Query 243681 GCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGA 243716 | | ||||| || || || || | ||||| ||||| Sbjct 159857 GATGATTTCCCTCCAGGGCAAGGCAAACTTTTTCGA 159892 >seq4 Length=2444010 Score = 91.5 bits (100), Expect = 3e-13 Identities = 190/283 (67%), Gaps = 0/283 (0%) Strand=Plus/Minus Query 297436 TGTGAAAATATATCGTGCACTCGCGTGATCCTTACCACCCTGCAATCTCGAACCGAACTG 297495 |||||||||||| || || ||||| ||||| || || |||| | | ||||| || Sbjct 744169 TGTGAAAATATAACGGGCGCTCGCAGCGTCCTTGCCGCCTTGCAGACGAGTTCCGAATTG 744110 Query 297496 GCCCTCCGGCAACAACCAGTTGATGTTATTGCTTCCGACATAATCCTGTGCAAGGTTCAC 297555 || | || | | | |||||||||| ||||| || ||| | | || || ||| || Sbjct 744109 ACCGTTGGGGGAGAGCAAGTTGATGTTGTTGCTGCCAACAAAGTTTTGCGCCAGGCCGAC 744050 Query 297556 GATGGTCCCTTGCAGAGATGCTTCGCCATGGTGATAGGCGCTATGCTCTGCAACGTAACC 297615 || || | ||||| || | || || ||||| || | | || || | |||||||| Sbjct 744049 AATCGTACTCTGCAGGGACACCTCACCGTGGTGGTACCCAGTGTGTTCCGATACGTAACC 743990 Query 297616 GCTGAACTGTGCAACCTTCACGTCGGTCGTCAAATTGCGCTTGAAAGCTGAATATATCAC 297675 || |||||||||||| | || || | | |||||||||||| | | || || Sbjct 743989 AGCGAGCTGTGCAACCTTGATCTCCTTCTTGAGATTGCGCTTGAAGCAACCAAACATGAC 743930 Query 297676 TTTCCGTTGAGAAGGTTTGAAACCATCAACGACCGACGGAATG 297718 || || || ||| |||| ||| || | || ||||||||| Sbjct 743929 CTTGCGCTGGCCAGGCTTGAGACCGTCGGCAACTGACGGAATG 743887 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102879505427250