Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20guehoae_20[genbank_20GCA_5F001600415.1_202016- 03-01] 35 sequences; 33,698,914 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq18 134 3e-26 seq3 127 5e-24 >seq18 Length=639095 Score = 134 bits (148), Expect = 3e-26 Identities = 148/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| |||||||| ||||||||||| |||| ||||||||| | || || | || || Sbjct 13120 AGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCC 13061 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| ||||||||||||||||||||||||||||| || || || ||| Sbjct 13060 TCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCC 13001 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| || | ||||| | | || || || | ||||||||| Sbjct 13000 TGGATCTTCGACTTGACGTTGTCAATCGTGTCCGACGACTCGACCTCGAGGGTGATCGTC 12941 Query 199598 TTACCCGTGAGAGTTTT 199614 || |||||||| || || Sbjct 12940 TTTCCCGTGAGCGTCTT 12924 Score = 129 bits (142), Expect = 1e-24 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || ||||| || ||||||||||| |||| |||||| |||| ||| || | || || Sbjct 12697 AGAACGAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAATCAGACAATGTGCGGCCGTCC 12638 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || ||||||||||| ||||| ||||||||||||||||| ||| ||| || || ||| Sbjct 12637 TCGAGCTGCTTTCCCGCGAAAATGAGACGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCC 12578 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||||||| |||| ||||| | | || || || | ||||| ||| Sbjct 12577 TGGATCTTGCTCTTCACGTTGTCGATCGTGTCGGAAGACTCGACCTCAAGGGTGATGGTC 12518 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || || || || || || Sbjct 12517 TTGCCGGTAAGGGTCTTGACGAAGATCTG 12489 >seq3 Length=2791342 Score = 127 bits (140), Expect = 5e-24 Identities = 148/200 (74%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | ||||||||||| || ||||||||||| |||| ||||||||| | | || Sbjct 1929953 CGAAGGCGGAGGACAAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTG 1929894 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || || || |||||||| |||||||||||||| ||||||||||| || || || Sbjct 1929893 CGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGGGGGATGCCC 1929834 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| ||| ||| |||| |||||| | | || || || | Sbjct 1929833 TCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCCGAAGACTCCACCTCAAGG 1929774 Query 199589 GTGATCGTCTTACCCGTGAG 199608 ||||| ||||| |||||||| Sbjct 1929773 GTGATGGTCTTGCCCGTGAG 1929754 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178921071327345