Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20guehoae_20[genbank_20GCA_5F001600415.1_202016- 03-01] 35 sequences; 33,698,914 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq3 132 5e-26 seq18 129 7e-25 seq1 111 2e-19 >seq3 Length=2791342 Score = 132 bits (146), Expect = 5e-26 Identities = 134/172 (78%), Gaps = 2/172 (1%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||| || || ||||| |||| |||||||||||||||||||| Sbjct 1929924 CTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 1929865 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | |||||||||||||| || | || |||||||||| |||||| ||||| ||| Sbjct 1929864 GATGAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGT 1929806 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAG 46572 | | | ||||| || ||||| || | |||||||| |||||||| || Sbjct 1929805 TGTCGATGGTGTCCGAAGACTCCACCTCAAGGGTGATGGTCTTGCCCGTGAG 1929754 >seq18 Length=639095 Score = 129 bits (142), Expect = 7e-25 Identities = 137/178 (77%), Gaps = 2/178 (1%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||||||||| || ||||| |||| |||||||||||||||||||| Sbjct 13100 CTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 13041 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||||||||||| | || | | |||||||||| ||||||| ||||| ||| Sbjct 13040 GATGAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTCGACTTGA-CGT 12982 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTT 46578 | | | |||||| ||| || || || | ||||| || || ||||| ||||| || Sbjct 12981 TGTCAATCGTGTCCGACGACTCGACCTCGAGGGTGATCGTCTTTCCCGTGAGCGTCTT 12924 Score = 125 bits (138), Expect = 8e-24 Identities = 145/193 (75%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||| || || | ||||| |||| ||||||||||| || ||||| Sbjct 12677 CTCCTTCTGGATGTTGTAATCAGACAATGTGCGGCCGTCCTCGAGCTGCTTTCCCGCGAA 12618 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||||||||||||| || | || |||||||||| |||||| |||| | ||| Sbjct 12617 AATGAGACGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTCA-CGT 12559 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | ||||||| || || || || | |||||||| ||||| || || || || | Sbjct 12558 TGTCGATCGTGTCGGAAGACTCGACCTCAAGGGTGATGGTCTTGCCGGTAAGGGTCTTGA 12499 Query 46581 CAAAGATTTGCAT 46593 | ||||| ||||| Sbjct 12498 CGAAGATCTGCAT 12486 Score = 111 bits (122), Expect = 2e-19 Identities = 121/158 (77%), Gaps = 2/158 (1%) Strand=Plus/Minus Query 46416 TGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCT 46475 ||||||| || || ||||| |||| |||||||||||||||||||| || | |||||||| Sbjct 12063 TGTAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATAAGGCGCTGCT 12004 Query 46476 GGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCG 46534 |||||| || | || |||||||||| ||||||| ||||| ||| | | | ||||| Sbjct 12003 GGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTCGACTTGA-CGTTGTCGATGGTGTCC 11945 Query 46535 CTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAG 46572 || || || || | |||||||| ||||| || || Sbjct 11944 GAGGACTCGACCTCAAGGGTGATGGTCTTGCCAGTGAG 11907 Score = 111 bits (122), Expect = 2e-19 Identities = 121/158 (77%), Gaps = 2/158 (1%) Strand=Plus/Minus Query 46416 TGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCT 46475 ||||||| || || ||||| |||| |||||||||||||||||||| || | |||||||| Sbjct 12385 TGTAGTCCGAAAGGGTGCGACCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCT 12326 Query 46476 GGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCG 46534 |||||| || | || |||||||||| |||||| ||||| ||| | | | ||||| Sbjct 12325 GGTCGGGGGGAATGCCCTCCTTGTCCTGAATCTTCGACTTGA-CGTTGTCGATGGTGTCC 12267 Query 46535 CTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAG 46572 || || || || | |||||||| ||||| ||||| Sbjct 12266 GAGGACTCGACCTCAAGAGTGATGGTCTTGCCGGTCAG 12229 >seq1 Length=3969531 Score = 111 bits (122), Expect = 2e-19 Identities = 121/158 (77%), Gaps = 2/158 (1%) Strand=Plus/Plus Query 46416 TGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCT 46475 ||||||| || || ||||| |||| |||||||||||||||||||| || | ||||||| Sbjct 1130107 TGTAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCT 1130166 Query 46476 GGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCG 46534 |||||| || | || |||||||||| |||||| ||||| ||| | | | |||||| Sbjct 1130167 GGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGTTGTCAATCGTGTCC 1130225 Query 46535 CTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAG 46572 || || || || | |||||||| |||||||| || Sbjct 1130226 GAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAG 1130263 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565238152708200