Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20guehoae_20[genbank_20GCA_5F001600415.1_202016- 03-01] 35 sequences; 33,698,914 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq18 288 1e-72 seq3 116 4e-21 seq1 107 2e-18 seq6 100 3e-16 seq2 98.7 1e-15 seq16 93.3 4e-14 seq7 82.4 8e-11 >seq18 Length=639095 Score = 288 bits (318), Expect = 1e-72 Identities = 481/689 (70%), Gaps = 20/689 (3%) Strand=Plus/Minus Query 132627 CTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGGC 132686 ||| ||||| || | || |||| | |||||| | | |||||| || |||||||| || Sbjct 159893 CTCGAAAAAGTTTGCCTTGCCCTGGAGGGAAATCATCTCCATAAAGTCGAAGGGGTTTGC 159834 Query 132687 TGTGTTGTAGTGCTTGG---TGCCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAACTC 132743 | ||| | |||| |||||| || ||||||| || | |||||| || ||||| Sbjct 159833 AGAGTTCCAAATCTTGTCATTGCCGA---GGGCGACGAGGAGGCGGTCGGCGACAAACTC 159777 Query 132744 GATGTATTGCGACATG-GTTTCGCAATTAAGTCCCAGCAGACGCACCGGCAGCGCTTCGG 132802 ||||| || ||||| | |||| | || | || | || ||| || ||||| |||| Sbjct 159776 AATGTACTGGCACATGAGCTTCG-AGTTCATGCCAATGAGCGACACGGGGAGCGCGTCGG 159718 Query 132803 TGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTCCCTAACGCGCG-CCGCG 132861 |||| || |||||| || |||||| ||| || || | | | || | ||| | Sbjct 159717 TGAGGAACTCTTGCTCAATCTTGACCGCCTCGCGGATAATCTTGTTGAT-CGTGTCCGGG 159659 Query 132862 CTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCG 132921 ||| || || || || |||| | | ||| ||||||||| |||| |||||| Sbjct 159658 TGCGGGCGGCGCTGCAGGTGGGTGAAGAGGAGGCACGCAAAGTCGGTGTGCAGACCCTCG 159599 Query 132922 TCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGC 132981 || | |||||||| |||||| ||| || | ||| |||||||| ||||| || |||||| Sbjct 159598 TCGCGCGAAATGAGCTCGTTGGAGAAGGTGAGGCCCGGCATGAGACCGCGCTTCTTGAGC 159539 Query 132982 CAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACC 133041 ||||| |||| || || ||| |||||||||| ||||||||||||||| || || | | Sbjct 159538 CAAAAGATGGACGCAAACGAGCCGGAAAAGAAGATGCCCTCGACGGCCGCAAACGCAATC 159479 Query 133042 AGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTT 133101 ||||||||| | || || | | || | | ||||||||||||||||| |||||||| Sbjct 159478 AGGCGCTCGGCAAAGGTAGACTTTTCGTCCGAAATCCAGCGCAGCGCCCAGTCGGCCTTC 159419 Query 133102 TCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACAAACGGAGTTTCTCTTCCGAGGA- 133160 | |||| |||||| ||||| || || ||||| |||| || || || | | Sbjct 159418 TTCTTGATGCACGGGATCGTCTCAATCGCGTTGAACA-----GGTACGTCCGGCGCGCAT 159364 Query 133161 ----ACGCACGTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGG 133216 || | ||| |||||||| ||| ||| ||| | || ||||| | ||||||||| Sbjct 159363 TGTCGCGAATGTACGTGTCGATCAGGAGCGAGTACGTCTCAGAGTGGATGTTCTCCATCA 159304 Query 133217 CGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCT 133276 || || |||||||| || | |||||| | | |||||| || ||| |||| Sbjct 159303 TAATCTGGAAGCCGTAGAATGTCTTGGCCTCGGCAATCTGCACCTCGCCGCAGAAGCGCT 159244 Query 133277 CGACCAGATTTTCGTTGACGATGCCGTCG 133305 |||| || ||||||||||| ||||||||| Sbjct 159243 CGACAAGGTTTTCGTTGACAATGCCGTCG 159215 Score = 127 bits (140), Expect = 2e-24 Identities = 152/204 (75%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || || ||||| ||||||||| | || |||||| | || Sbjct 12486 ATGCAGATCTTCGTCAAGACCCTTACCGGCAAGACCATCACCCTTGAGGTCGAGTCTTCC 12545 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| || | | | | |||| || |||| ||||| ||||| ||||| ||||||| Sbjct 12546 GACA-CGATCGACAACGTGAAGAGCAAGATCCAGGACAAGGAGGGCATTCCTCCCGACCA 12604 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| ||||||| |||||| || ||||| || |||| ||||| | || ||||| Sbjct 12605 GCAGCGTCTCATTTTCGCGGGAAAGCAGCTCGAGGACGGCCGCACATTGTCTGATTACAA 12664 Query 38423 CATCCAAAAGGAAGCGACGCTGCA 38446 |||||| ||||| ||||||| || Sbjct 12665 CATCCAGAAGGAGTCGACGCTTCA 12688 Score = 127 bits (140), Expect = 2e-24 Identities = 143/189 (76%), Gaps = 2/189 (1%) Strand=Plus/Plus Query 38259 AAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACA-GCGTGCAAAC 38317 || ||||||||||| || || |||||| |||| |||||| | | |||| | || ||| Sbjct 12924 AAGACGCTCACGGGAAAGACGATCACCCTCGAGGTCGAGTCGTCGGACACGATTGACAAC 12983 Query 38318 GCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTA 38377 | | || || |||| ||||| ||||| || ||| | ||||| ||||| ||||| | Sbjct 12984 G-TCAAGTCGAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAGCAGCGTCTCATCTT 13042 Query 38378 CGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGC 38437 ||| ||||| ||||| || |||| |||||||| ||||||||||||||| ||||| | Sbjct 13043 CGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTGTCCGACTACAACATCCAGAAGGAGTC 13102 Query 38438 GACGCTGCA 38446 |||||| || Sbjct 13103 GACGCTCCA 13111 Score = 84.2 bits (92), Expect = 2e-11 Identities = 100/135 (74%), Gaps = 3/135 (2%) Strand=Plus/Minus Query 133308 GGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAA---GCG 133364 ||| || || || ||||| ||||||| ||| || | ||||||||||||||| | | Sbjct 159165 GGCAGCAAAGAACGCCAGGACGTGCTCGATAAAGTAGCGCTCGTTGTCGTTGAGCTTGTT 159106 Query 133365 CTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTC 133424 ||||||||| || ||| | |||| | ||||||| | |||||||||||||||| Sbjct 159105 GTCCCAGTCGTGCAGGTCGGGCGCGAGGTTGATCTCCTCGGCCGTCCAAAACGACGCCTG 159046 Query 133425 GGCTTTTTTGTACAT 133439 || || |||||||| Sbjct 159045 CGCCTTCTTGTACAT 159031 >seq3 Length=2791342 Score = 116 bits (128), Expect = 4e-21 Identities = 137/183 (75%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 38265 CTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAA 38323 ||||||||||| ||||||||| | || || ||| | | |||| | | | |||| | || Sbjct 1929754 CTCACGGGCAAGACCATCACCCTTGAGGTGGAGTCTTCGGACACCATCGACAACG-TCAA 1929812 Query 38324 AGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGG 38383 || |||| ||||| ||||| || ||| ||||||| ||||| ||||| | ||| || Sbjct 1929813 GTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAGCAGCGCCTCATCTTCGCCGG 1929872 Query 38384 CAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCT 38443 ||| ||||| || |||| |||||||| |||||||||||||| ||||| |||| || Sbjct 1929873 CAAGCAGCTCGAGGACGGCCGCACCCTTTCGGACTACAACATCCAGAAGGAGTCGACCCT 1929932 Query 38444 GCA 38446 || Sbjct 1929933 TCA 1929935 >seq1 Length=3969531 Score = 107 bits (118), Expect = 2e-18 Identities = 120/158 (76%), Gaps = 2/158 (1%) Strand=Plus/Minus Query 38265 CTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACA-GCGTGCAAACGCTTAA 38323 ||||||||||| ||||||||| |||| |||||| || | |||| | || |||| | || Sbjct 1130263 CTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCGGACACGATTGACAACG-TCAA 1130205 Query 38324 AGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGG 38383 || |||| ||||| ||||| || ||| ||||||| ||||| ||||| | ||| || Sbjct 1130204 GTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAGCAGCGTCTCATCTTCGCCGG 1130145 Query 38384 CAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 ||| ||||| || |||| |||||||| ||||||| Sbjct 1130144 CAAGCAGCTCGAGGACGGCCGCACCCTTTCGGACTACA 1130107 >seq6 Length=2162681 Score = 100 bits (110), Expect = 3e-16 Identities = 109/141 (77%), Gaps = 4/141 (3%) Strand=Plus/Minus Query 107663 CTTGAGGTTGCCCAGGTCGCCGACGTGCCTGATCTCGGCGTCGGGCGCGCCGTG-GTCGC 107721 ||||| |||||| ||||| |||||||| | | ||| |||||||||||||||||| ||| Sbjct 1199144 CTTGATGTTGCCGAGGTCACCGACGTGGCGGTTCTTGGCGTCGGGCGCGCCGTGCGTCTT 1199085 Query 107722 GCTTCGT-CGGGTTGAAATGCTCGCCGGCCGACGTGCAGCCGTTGCTCGCGTCGCCGAAC 107780 | |||| ||||| || || |||||| || | ||||||| | |||||| ||| Sbjct 1199084 G--TCGTAAGGGTTAAAGTGGCCGCCGGTGGAAGCGCAGCCGCCGGAAATGTCGCCAAAC 1199027 Query 107781 TCGTGCACGTGGAAGCCGTGC 107801 ||||||||||||||||||| Sbjct 1199026 GTGTGCACGTGGAAGCCGTGC 1199006 >seq2 Length=3829864 Score = 98.7 bits (108), Expect = 1e-15 Identities = 132/179 (74%), Gaps = 6/179 (3%) Strand=Plus/Minus Query 132880 TGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCG 132939 || ||| | | |||||| ||||||||| ||| |||||||| | | ||||| ||| Sbjct 2322426 TGGTTGTATAGCAAGCACGCAAAGTCGGTATGGGTTCCCTCGTCGCGGCTGATGAGCTCG 2322367 Query 132940 TTGCTGAAA--GTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGA 132997 || ||||| || | || ||||||||||||| || ||||||||||| || || || | Sbjct 2322366 TT--TGAAAACGTAAGACCACGCATGAGGCCGCGCTTCTTGAGCCAAAAGATTGCAGC-A 2322310 Query 132998 AACTGCCC-GAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAA 133055 ||| |||| |||||||||| |||||| || || || || | ||||||| || ||| Sbjct 2322309 AACGGCCCAGAAAAGAAGATGCCCTCCACACAGGCAAACGCAATCAGGCGCGTGCGGAA 2322251 >seq16 Length=1014063 Score = 93.3 bits (102), Expect = 4e-14 Identities = 104/139 (75%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 107663 CTTGAGGTTGCCCAGGTCGCCGACGTGCCTGATCTCGGCGTCGGGCGCGCCGTGGTCGCG 107722 ||||| |||||| ||||| || | ||||| | ||| | || || |||||||||||| | Sbjct 1002875 CTTGATGTTGCCAAGGTCCCCAATGTGCCGGTTCTTGTCGGACGGTGCGCCGTGGTCGTG 1002934 Query 107723 CTTCGTCGGGTTGAAATGCTCGCCGGCCGACGTGCAGCCGTTGCTCGCGTCGCCGAACTC 107782 || ||||||| | ||| |||| | | |||| ||| | | ||||||||||| Sbjct 1002935 GTTGAACGGGTTGTAGTGCGCGCCCGTGCTCATGCACCCGGAGGACAGGTCGCCGAACTG 1002994 Query 107783 GTGCACGTGGAAGCCGTGC 107801 ||||||||||||||||||| Sbjct 1002995 GTGCACGTGGAAGCCGTGC 1003013 >seq7 Length=1438143 Score = 82.4 bits (90), Expect = 8e-11 Identities = 105/142 (74%), Gaps = 6/142 (4%) Strand=Plus/Plus Query 107663 CTTGAGGTTGCCCAGGTCGCCGACGTGCCTGATCTCGGCGTCGGGCGCGCCGTGGTCGCG 107722 ||||| |||||| ||||| |||||||| | ||||| ||||| | |||| || | Sbjct 194025 CTTGACGTTGCCGAGGTCACCGACGTGGCG---CTCGGTGTCGGTGGGGCCGCCGTGGTT 194081 Query 107723 CTT--CGTCGGG-TTGAAATGCTCGCCGGCCGACGTGCAGCCGTTGCTCGCGTCGCCGAA 107779 ||| ||| ||| ||||| || |||||||||| ||||||||||| ||| ||| | Sbjct 194082 CTTGCCGTGGGGGTTGAAGTGGGCGCCGGCCGAGGTGCAGCCGTTCGAGTTGTCACCGTA 194141 Query 107780 CTCGTGCACGTGGAAGCCGTGC 107801 || ||| | |||||||||| || Sbjct 194142 CTGGTGGATGTGGAAGCCGCGC 194163 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500172581174400