Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20guehoae_20[genbank_20GCA_5F001600415.1_202016- 03-01] 35 sequences; 33,698,914 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq18 154 2e-32 seq1 116 4e-21 seq14 93.3 5e-14 seq2 89.7 6e-13 >seq18 Length=639095 Score = 154 bits (170), Expect = 2e-32 Identities = 340/495 (69%), Gaps = 16/495 (3%) Strand=Plus/Plus Query 65021 AGAAGAAGGCGAAATGGGCAATGAAATGGTTT---GACACAAAGTCTCGCTCCTTCGCCG 65077 |||||||||| | ||||| || ||| || ||| ||||||| |||| |||| Sbjct 159415 AGAAGAAGGCCGACTGGGCGCTGCGCTGGATTTCGGACGAAAAGTCTA---CCTTTGCCG 159471 Query 65078 AGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCG-CT 65136 ||||||| ||||||||||| || ||||| |||||||| ||||| || || |||| | Sbjct 159472 AGCGCCTGATTGCGTTTGCGGCCGTCGAGGGCATCTTCTTTTCCGGCTCGTT-TGCGTCC 159530 Query 65137 ATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATT 65196 || | |||| | |||||||| ||||||||||| ||||| |||||| || || || ||| Sbjct 159531 ATCTTTTGGCTCAAGAAGCGCGGTCTCATGCCGGGCCTCACCTTCTCCAACGAGCTCATT 159590 Query 65197 TCCCGAGATGAGGGTCTCCACCAGGAGTTTGCCGTG-GAGCTCTTCAAGACTTTGCGTAA 65255 || || || |||||||| ||| || |||| |||| ||||||| ||| Sbjct 159591 TCGCGCGACGAGGGTCTGCACACCGACTTTG-CGTGCCTCCTCTTCACCCACCTGCAGCG 159649 Query 65256 TAGACC-CACTACCGAAACTATCCACGCCATCGTGAAAGAGGCGGTTGAGATTGAGAAAG 65314 | || ||| | || || ||| || || | |||||||| |||||||| ||| Sbjct 159650 CCGCCCGCAC-CCGGACACGATCAACAAGATTATCCGCGAGGCGGTCAAGATTGAGCAAG 159708 Query 65315 GGTTCATCTTGGACGCACT-CCCATGTAATCTCATCGGTATGAACTCTGAGAAGATGTCC 65373 |||| || ||||| || ||| ||| ||||| || |||||||| || |||| | Sbjct 159709 AGTTCCTCACCGACGCGCTCCCCGTGT-CGCTCATTGGCATGAACTCGAAGCTCATGTGC 159767 Query 65374 GAGTACATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTGG-GGTGCCACCCATTTG 65432 |||||||||||| ||| | || || |||||| | || || || ||||| Sbjct 159768 CAGTACATTGAGTTTGTCGCCGACCGCCTCCTCGTCGCCCTCGGCAATGACA-AGATTTG 159826 Query 65433 GAACGCGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGATGGGAAGACCAACTT 65492 |||| | || || || ||||||||||| | ||| ||| | || ||| | ||||| Sbjct 159827 GAACTCTGCAAACCCCTTCGACTTTATGGAGATGATTTCCCTCCAGGGCAAGGCAAACTT 159886 Query 65493 CTTTGAGAAGCGAGT 65507 || ||| ||| || Sbjct 159887 TTTCGAGTCGCGCGT 159901 >seq1 Length=3969531 Score = 116 bits (128), Expect = 4e-21 Identities = 667/1051 (63%), Gaps = 37/1051 (4%) Strand=Plus/Minus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 || ||| ||||| | ||||| || || |||| |||||||| || ||||||| || Sbjct 1697318 CCCCAGCACATGCTTATGCGTGTTGCCGTCGGTATCCACGGCGACAACATTGAAAAGGTT 1697259 Query 75272 TTGGAGACATACGACAAGATGTCC-CAAGGTATGTTCATTCACGCAACACCAACCCTCTT 75330 | ||||| ||| || ||||| | | || || | ||||| | || |||||||| Sbjct 1697258 CTCGAGACCTACAACCTCATGTCGTCGCGCTACTTT-ACGCACGCGTCGCCCACCCTCTT 1697200 Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390 ||| || ||||| || | || ||||| |||||||| |||| | ||||| || Sbjct 1697199 CAACGCCGGTACCCCGCACGCACAAATGTCGTCGTGCTTCCTCGTCGCGATGAAGGACGA 1697140 Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 75450 ||| || |||| ||||| | || || | | |||||||| ||||| ||| ||||| Sbjct 1697139 CTCGATTGACGGCATCTACGACACGCTCAAGACCTGTGCGCAGATCTCCAAGACTGCTGG 1697080 Query 75451 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGT--ATTCGGGGGACA 75508 |||||||| | ||||| || | | | |||| | ||||| ||| ||| || Sbjct 1697079 TGGTATTGGTCTCCACATTCACAACATTCGTGCCA--AGGGCTCGTACATTGCGGGTACC 1697022 Query 75509 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 75568 || || | || | ||||| | || ||||| || | | | || || || || || Sbjct 1697021 AACGGCTACTCGAACGGTATCGTCCCCATGCTCCGTGCCTACGATGCGACGGCCCGTTAC 1696962 Query 75569 GTAAATCAAGCGGGGCGTC-GCAAG------GGGTCCATCGCGGTCTACTTGGAACCATG 75621 | || | | ||||| | |||| || || | || ||||| | || || || Sbjct 1696961 G----TCGACCAGGGCGGCAACAAGCGCCCAGGTGCCTTTGCCATCTACCTCGAGCCCTG 1696906 Query 75622 GCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCG 75681 ||| ||||| || | || ||||| || | || ||||| || | || || | || Sbjct 1696905 GCACGCCGACGTCTTTGACTTCCTCGACCTCCGCAAGAACCACGGCAAGGAGGAAG-TCC 1696847 Query 75682 GTG-TAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGG 75740 ||| | | || ||||| | | |||||||| || ||||| ||||||||||| || ||| Sbjct 1696846 GTGCTCGTGACCTCTTCTACGCGCTGTGGATCCCCGACCTGTTCATGAAGCGTGTCGAGA 1696787 Query 75741 AGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACG--CGGT 75798 || ||| | ||| | || | || || | | || || || ||| |||| | | | Sbjct 1696786 TGGACGGTGACTGGACGCTCATGTGCCCCGCCGAGTGCCCCGGCCTCGCCGATGTCCACT 1696727 Query 75799 GGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGA-AGAGGAGGGTAGAGC--CAATGC 75855 | ||||| || || | |||||| | || || | | || || || ||| Sbjct 1696726 CG--GAGGAATTCGAGGAGCTCTACCTGAGCTACGAGCGTGCCGGCAAGGGCCGCAA--- 1696672 Query 75856 GACTGTACCAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAA 75914 ||| | | || ||| | | | ||| || |||||| | | ||||| |||||||| Sbjct 1696671 GAC-GATCAAGGCGCAAAAGCTCTGGTTTGCCATTCTCGAGGCTCAGACTGAGACTGGCG 1696613 Query 75915 CACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAA 75974 || | ||||| |||||||| || |||| ||| ||||| || | | || | Sbjct 1696612 GTCCCTTCATGCTCTACAAGGACGCGGCCAACAGCAAGTCGAACCAGCAGCACCTCGGCA 1696553 Query 75975 CAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGG 76034 | |||||| || || || ||||| || || | |||||| | || ||| | Sbjct 1696552 CGATCAAGTCGTCCAACCTCTGCACTGAGATCATCGAGTACTCGTCGCCCGACGAGGTCG 1696493 Query 76035 CTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTT 76094 | || ||||| | || || || ||||| || | |||||| ||| | || | Sbjct 1696492 CCGTCTGCAACCTTGCGTCCATTGCCCTCCCGGCCTTTGTCAACTTTGAGGACCAGACCT 1696433 Query 76095 TTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCA 76154 || | | || || || || || |||||| | | ||||| || || ||| |||| Sbjct 1696432 ACGACTTCCAGAAGCTCCACGACATTACAAAGGTCATCACCAAGAACCTCGACCAGGTCA 1696373 Query 76155 TTGACAGAAATTTTTATCCCGT---TGAGACTGCGCGAAAGTCTAATATGCGACACAGAC 76211 || | | || | || ||||| ||| || || || || || ||||| ||| | | Sbjct 1696372 TTACCCGCAACTACTACCCCGTGCCCGAG---GCTCGCAACTCGAACATGCGTCACCGCC 1696316 Query 76212 CTATTGGTTTGGGTGTTCAAGGTCTCGCGGA 76242 | | ||| | ||||| || ||||| || || Sbjct 1696315 CCGTCGGTCTTGGTGTCCAGGGTCTTGCCGA 1696285 >seq14 Length=1065811 Score = 93.3 bits (102), Expect = 5e-14 Identities = 217/322 (67%), Gaps = 8/322 (2%) Strand=Plus/Plus Query 175182 CCGCTTCAGTGATGTTGAGGGGATTGACGCCGCCAAAGATGAACTTGAAGAGATTGTGGA 175241 ||||||| | || |||| ||| || |||| || || || || | ||| |||| | Sbjct 788791 CCGCTTCCGCGACGTTGCGGGCATGGACGAGGCAAAGGAGGAGATCATGGAGTTTGTCAA 788850 Query 175242 TTTTCTCAAGCAACCCGAGAGATATTTTG-GAAG--TGGTGCCAAGATCCCCCGAGGCGC 175298 || |||||| | || ||| | | | |||| |||||||||||| ||||| || || Sbjct 788851 GTTCCTCAAGGAGCC---GAGCAAGTACGAGAAGCTTGGTGCCAAGATTCCCCGCGGTGC 788907 Query 175299 CCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTCCTCGCCCGAGCCATCGCGGGTGA 175358 | ||||| | || ||| ||||| || ||||| || || ||| || | ||||| || Sbjct 788908 CATTCTCTCTGGCCCGCCCGGTACCGGTAAGACGCTGCTTGCCAAGGCGACTGCGGGCGA 788967 Query 175359 ATCAAATGTCCCATTCAT-CCAGTGCTCTGCCGCAAACTTTGTGGAGATGTTTGTTGGTG 175417 |||| || || ||| | | || ||| | | | ||||||||||||||||| |||| Sbjct 788968 GGCAAAGGTGCCGTTCCTGTCCGT-CTCGGGTTCCGAGTTTGTGGAGATGTTTGTCGGTG 789026 Query 175418 TGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGCCCGCGAAAATCAACCATGTATTG 175477 | || || | || ||||| || |||| | || ||| | || || || || Sbjct 789027 TCGGCCCCTCGCGTGTGCGCGACCTGTTTGCGACGGCGCGCAAGAACGCCCCCTGCATCA 789086 Query 175478 TCTTCATTGATGAGATTGATGC 175499 |||| || || |||||||| || Sbjct 789087 TCTTTATCGACGAGATTGACGC 789108 >seq2 Length=3829864 Score = 89.7 bits (98), Expect = 6e-13 Identities = 146/204 (72%), Gaps = 5/204 (2%) Strand=Plus/Plus Query 65008 GTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTTGACACAAAGTCTCGC 65067 ||||||||||| |||||||||| | ||||| | || | || || | | | || Sbjct 2322191 GTACCATGTATCCAGAAGAAGGCCGACTGGGCGCTCAAGTACATT-ACGCCCGATAT-GC 2322248 Query 65068 TCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCA 65127 ||||| | |||||| |||||||||| ||||||||||| |||||||| || ||| | Sbjct 2322249 -CCTTCCGCACGCGCCTGATTGCGTTTGCCTGTGTGGAGGGCATCTTCTTTTCTGGGCCG 2322307 Query 65128 TTCTGC-GCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAA 65186 || ||| || || | |||| | |||||||| || ||||||| || || || ||||| Sbjct 2322308 TT-TGCTGCAATCTTTTGGCTCAAGAAGCGCGGCCTCATGCGTGGTCTTACGTTTTCAAA 2322366 Query 65187 TGAACTTATTTCCCGAGATGAGGG 65210 || || || ||| || ||||| Sbjct 2322367 CGAGCTCATCAGCCGCGACGAGGG 2322390 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596569339000800