Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20guehoae_20[genbank_20GCA_5F001600415.1_202016- 03-01] 35 sequences; 33,698,914 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq18 111 1e-19 seq7 93.3 4e-14 seq1 93.3 4e-14 >seq18 Length=639095 Score = 111 bits (122), Expect = 1e-19 Identities = 287/433 (66%), Gaps = 11/433 (3%) Strand=Plus/Plus Query 46824 GCCGAGCGCATGGTGGCATTCGCGATAGTCGAAGGCGTGtttttttCGGGCAGTTTTGCC 46883 ||||||||| || | || || ||| ||||| ||| | || ||||| ||| ||||| Sbjct 159468 GCCGAGCGCCTGATTGCGTTTGCGGCCGTCGAGGGCATCTTCTTTTCCGGCTCGTTTGCG 159527 Query 46884 GCCATTTTTTACATTAAAACCAAAGGCATAATGCCGGGCCTGACGTTCAGTAACGAGTTG 46943 |||| |||| | || | || | ||||||||||| || ||| |||||| | Sbjct 159528 TCCATCTTTTGGCTCAAGAAGCGCGGTCTCATGCCGGGCCTCACCTTCTCCAACGAGCTC 159587 Query 46944 ATCTCGCGCGACGAAGGACTACACACGGACTTTGCGTGTCTCTATTACAAGACGCGCGTG 47003 || ||||||||||| || || ||||| ||||||||||| ||| | | || | | || Sbjct 159588 ATTTCGCGCGACGAGGGTCTGCACACCGACTTTGCGTGCCTCCTCTTC---ACCCACCTG 159644 Query 47004 AATGAGAAATTAAACTCGGACACGATCCTGAGCATGTTTA---GGGAGGCGGTGAGCATC 47060 | || ||||||||||| | || | ||| | |||||||| | || Sbjct 159645 CAGCGCCGCCCGCACCCGGACACGATC---AACAAGATTATCCGCGAGGCGGTCAAGATT 159701 Query 47061 GAAAAGGAGTTTTTTACTGCGGCGCTGCCCGTCGCCTTGCTGGGCATGAACGCACAGTCT 47120 || | ||||| | || | ||||| ||||| | | | ||||||||| | || Sbjct 159702 GAGCAAGAGTTCCTCACCGACGCGCTCCCCGTGTCGCTCATTGGCATGAACTCGAAGCTC 159761 Query 47121 ATGTGCGAATATATTGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGACAACCGAAA 47180 |||||| | || ||||||||||| || || || || | || ||||| ||| || Sbjct 159762 ATGTGCCAGTACATTGAGTTTGTCGCCGACCGCCTCCTCGTCGCCCTCGG-CAATGACAA 159820 Query 47181 TATTT-TAATGCTCGTAATCCGTTTGAGTTTATGAACAACATTTCGCTCGAGGGCAAAAC 47239 |||| || || || || || || |||||| | | ||||| ||| ||||||| | Sbjct 159821 GATTTGGAACTCTGCAAACCCCTTCGACTTTATGGAGATGATTTCCCTCCAGGGCAAGGC 159880 Query 47240 CAATTTTTTCGAG 47252 || ||||||||| Sbjct 159881 AAACTTTTTCGAG 159893 >seq7 Length=1438143 Score = 93.3 bits (102), Expect = 4e-14 Identities = 108/143 (76%), Gaps = 2/143 (1%) Strand=Plus/Plus Query 51731 AGCCTCGACATTGCCCAAGTCGCCGACGTGGCGCATCGCCG-CGTTCGGAGCGCCGTGGT 51789 || || ||| ||||| | ||| |||||||||||| ||| | || | || ||||||||| Sbjct 194022 AGTCTTGACGTTGCCGAGGTCACCGACGTGGCGC-TCGGTGTCGGTGGGGCCGCCGTGGT 194080 Query 51790 CGCTGCCGGTGGGGTTGAAGTGTTCGCCCGCCGACGTGCAGCCGTTGCTGGTGTCGCCGA 51849 ||||| |||||||||||| |||| ||||| ||||||||||| | |||| ||| Sbjct 194081 TCTTGCCGTGGGGGTTGAAGTGGGCGCCGGCCGAGGTGCAGCCGTTCGAGTTGTCACCGT 194140 Query 51850 ATTCGTGCACGTGGAATCCGTGC 51872 | | ||| | |||||| ||| || Sbjct 194141 ACTGGTGGATGTGGAAGCCGCGC 194163 >seq1 Length=3969531 Score = 93.3 bits (102), Expect = 4e-14 Identities = 431/666 (65%), Gaps = 21/666 (3%) Strand=Plus/Plus Query 147726 ATCGGCAAGGCCGGGACACTGATGCGGACACATCAGCGACCACATGTCGTCCGCGTTAAC 147785 |||||| |||||||| |||| || ||||| |||| ||| ||||| | || Sbjct 1696734 ATCGGCGAGGCCGGGGCACTCGGCGGGGCACATGAGCGTCCAGTCACCGTCCATCTCGAC 1696793 Query 147786 GCGTCGCATAAACAGATCCGGCACCCACAGCGCGTACATAAGATCGCGCGCTTTGCAATC 147845 || ||| ||||| || || | |||||||||||| | || || || || | || Sbjct 1696794 ACGCTTCATGAACAGGTCGGGGATCCACAGCGCGTAGAAGAGGTCACGAGCACGGACTTC 1696853 Query 147846 CTCGGCGCCCATGTTGCGTTTCAAA--TTAAGCACGCTATAGATGTCGGCGTGCCAGGGT 147903 ||| ||| ||| || | | | || | | | ||| ||||||||||||||| Sbjct 1696854 CTCCTTGCCGTGGTTC--TTGCGGAGGTCGAGGAAGTCAAAGACGTCGGCGTGCCAGGGC 1696911 Query 147904 TCAATGTAGACGGCCAGCGCACCTTTACGCTTT---CCGCCCTGGTCGACATGGCGCACC 147960 || | ||||| ||| | |||||| ||||| |||||||||||||| | || || Sbjct 1696912 TCGAGGTAGATGGCAAAGGCACCTGGGCGCTTGTTGCCGCCCTGGTCGACGTAACGGGCC 1696971 Query 147961 ATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCTCGCAGT-GCCGTTGGTGGAATT 148019 | | | | || | |||||| | | ||| ||| ||| ||||||||| Sbjct 1696972 GTCGCATCGTAGGCACGGAGCATGGGGACGATACCGTTCG-AGTAGCCGTTGGTACCCGC 1697030 Query 148020 GATCTTGCTGCCGCGGGCTCGCACTTCGTGCACGTTAACGCCAATGCCGCC-GCCGTACT 148078 || | ||| ||| || | | ||| | || | ||||| || || || || || Sbjct 1697031 AATGTACGAGCCCTTGGCACGAATGTTGTGAATGTGGAGACCAATACCACCAGCAGT-CT 1697089 Query 148079 TTGATATGGCAGCGCAATCGCCC--AATGTCGTGTAGATGCCGTCGATGCTGTCGTTTTT 148136 | || || | ||||| | | | || |||||||||||| || ||||| || Sbjct 1697090 TGGAGAT--CTGCGCACAGGTCTTGAGCGTGTCGTAGATGCCGTCAATCGAGTCGTCCTT 1697147 Query 148137 GA-CGCCAAGCAAAAAACACGAACACATTTGCGGAATCCGCGTTCCCGCCGAGAAAAGGG 148195 | ||| | | | || ||||| ||||||| | | | || || || ||| |||| Sbjct 1697148 CATCGCGACG-AGGAAGCACGACGACATTTGTGCGTGCGGGGTACCGGCGTTGAAGAGGG 1697206 Query 148196 TGGGACTCGCGTGCGTAAACAATTTTTGACT-CATCATGCGATACGTCTCAATAGCGTCT 148254 |||| |||||||||||| | ||| ||| | | || ||||| | | | | | Sbjct 1697207 TGGGCGACGCGTGCGTAAAGTAGCGC-GACGACATGAGGTTGTAGGTCTCGAGAACCTTT 1697265 Query 148255 TCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAGCATGTGCTGTGGTCGTTCG 148314 || |||| ||||||||| || || | || || ||||| ||||||||||| || || ||| Sbjct 1697266 TCAATGTTGTCGCCGTGGATACCGACGGCAACACGCATAAGCATGTGCTGGGGACGCTCG 1697325 Query 148315 GCAA-CTTGATTGTTGATCTTGAGAAGATATCCATTTTCGAGGGTTTTGTAACCAAAGTA 148373 |||| |||| || || |||||| ||||| || ||||| ||| | |||||||| Sbjct 1697326 GCAATCTTG-CCGTCGACCTTGAGGAGATAGGAGCGCTCCAGGGTCTTGAAGCCAAAGTA 1697384 Query 148374 CTTGTA 148379 ||||| Sbjct 1697385 GTTGTA 1697390 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476610991482600