Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20guehoae_20[genbank_20GCA_5F001600415.1_202016- 03-01] 35 sequences; 33,698,914 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq1 167 3e-35 seq18 154 2e-31 seq11 98.7 1e-14 seq21 95.1 2e-13 seq2 95.1 2e-13 seq6 93.3 6e-13 seq7 86.0 9e-11 >seq1 Length=3969531 Score = 167 bits (184), Expect = 3e-35 Identities = 319/468 (68%), Gaps = 19/468 (4%) Strand=Plus/Minus Query 259720 AGACTTTGGCTACTCGTACTTTGGTCTGGCGACCTTGCGCCGGTCCTACCTGACCAAAGT 259779 ||||||| ||||| |||||||| | |||| || || ||||| || ||| || Sbjct 1697400 AGACTTTAGCTACAACTACTTTGGCTTCAAGACCCTGGAGCGCTCCTATCTCCTCAAGGT 1697341 Query 259780 GCGCGATATTGTCGTCGAGCGGCCCCAGTATATGCTCATGCGTGTCGCCCTTGGCCATTA 259839 || | | | |||||| |||||| | ||||| |||||||| ||| | || || Sbjct 1697340 CGACGGCAAGATTGCCGAGCGTCCCCAGCACATGCTTATGCGTGTTGCCGTCGG----TA 1697285 Query 259840 TGGGTTTGCCGACGTCGACAATGCGCTGGAGCACGTGCTCGCCACCTACGAGGCCATGTC 259899 | | ||| |||||| | || | || |||| |||||| | |||||| Sbjct 1697284 T--------CCACGGCGACAACA---TTGAAAAGGTTCTCGAGACCTACAACCTCATGTC 1697236 Query 259900 GCAGCAGTTGTTCACCTCAGCGACGCCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCA 259959 | || | || || ||| ||||||| ||||| || ||||| || |||| | | || Sbjct 1697235 GTCGCGCTACTTTACGCACGCGTCGCCCACCCTCTTCAACGCCGGTACCCCGCACGCACA 1697176 Query 259960 GAATTCGTCGTGCTTTCTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCTATGACAC 260019 | ||||||||||| || | | ||||||| ||| ||||| || |||||||| ||||| Sbjct 1697175 AATGTCGTCGTGCTTCCTCGTCGCGATGAAGGACGACTCGATTGACGGCATCTACGACAC 1697116 Query 260020 GCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGCA--CAC 260077 ||||||| || |||| ||||||||| | || || || || ||| | || || ||| Sbjct 1697115 GCTCAAGACCTGTGCGCAGATCTCCAAGACTGCTGGTGGTATTGGTCT--CCACATTCAC 1697058 Query 260078 AAGGTGCGCGCCGCGGGCGCCTACGTGGCGGGCACCAACGGCCAGTCCAACGGCCTTGTG 260137 || | || ||| |||| | ||| | ||||| ||||||||| | || ||||| | || Sbjct 1697057 AACATTCGTGCCAAGGGCTCGTACATTGCGGGTACCAACGGCTACTCGAACGGTATCGTC 1696998 Query 260138 CCCATGCTTCGCGTTTTTAACGACACGGCGCGCTACGTCGACCAGTGC 260185 |||||||| || | | | | ||||| || |||||||||||| || Sbjct 1696997 CCCATGCTCCGTGCCTACGATGCGACGGCCCGTTACGTCGACCAGGGC 1696950 Score = 132 bits (146), Expect = 7e-25 Identities = 334/511 (65%), Gaps = 12/511 (2%) Strand=Plus/Minus Query 261788 GGCGGCGGCAAGCGCAAGGGCGCCTTTGCCTGCTACCTGGAACCGTGGCACGCCGACCTC 261847 |||||| ||||||| || ||||||||| |||||| || || |||||||||||| || Sbjct 1696952 GGCGGCAACAAGCGCCCAGGTGCCTTTGCCATCTACCTCGAGCCCTGGCACGCCGACGTC 1696893 Query 261848 ATCAACTGGCTGGACCTCAAAAAGAACCACGGCAAGGGAGGGGGAGAACCGGGCGCGCGC 261907 | ||| || |||||| |||||||||||||| |||| ||| | || || Sbjct 1696892 TTTGACTTCCTCGACCTCCGCAAGAACCACGGCAA-GGAG-----GAAGTCCGTGCTCGT 1696839 Query 261908 GATCTCTTTTACGGCCTGTGGACGTGCGACCTGTTTATGCGCCGCATGGTGACCGGCCGC 261967 || ||||| |||| ||||||| ||||||||| ||| || | | || | | | Sbjct 1696838 GACCTCTTCTACGCGCTGTGGATCCCCGACCTGTTCATGAAGCGTGTCGAGATGGACGGT 1696779 Query 261968 GACTGGTCGCTCTTTTGCCCGTCCGAGGCGCCCGGCCTGCACGAATGCTATGGCGCGGCC 262027 |||||| ||||| | ||||| ||||| |||||||| ||| | | | || Sbjct 1696778 GACTGGACGCTCATGTGCCCCGCCGAGTGCCCCGGCCTCGCCGATGTCCACTCGGAGGAA 1696719 Query 262028 TTTGACGCCCTCTA--TGAGNNNNNNNNNNNNNNNNNNNNNNCGC-GGACCGTCGTGCCC 262084 || || | ||||| |||| ||| ||| || | Sbjct 1696718 TTCGAGGAGCTCTACCTGAGCTACGAGCGTGCCGGCAAGGGCCGCAAGACGATCAAG--- 1696662 Query 262085 GCACGACAGATCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTACATG 262144 || | | || |||||| |||||| ||| ||| || | ||||| ||| |||| |||| Sbjct 1696661 GCGCAAAAGCTCTGGTTTGCCATTCTCGAGGCTCAGACTGAGACTGGCGGTCCCTTCATG 1696602 Query 262145 GTCTACAAGGACGCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCACGACAGAG 262204 ||||||||||||| | |||| | ||||||||| |||| ||||| | | | Sbjct 1696601 CTCTACAAGGACGCGGCCAACAGCAAGTCGAACCAGCAGCACCTCGGCACGATCAAGTCG 1696542 Query 262205 GCCAACCTGTGCACCGAGATCGTCCAGTTTTCGTCGCCCACCGAGGCAAGTGTGTGCAAC 262264 ||||||| ||||| |||||| || ||| ||||||||| ||||| || |||||| Sbjct 1696541 TCCAACCTCTGCACTGAGATCATCGAGTACTCGTCGCCCGACGAGGTCGCCGTCTGCAAC 1696482 Query 262265 CTCTCGAGCGTGGCCCTGCCCAAGTTTGTCA 262295 || || | | ||||| || ||||||| Sbjct 1696481 CTTGCGTCCATTGCCCTCCCGGCCTTTGTCA 1696451 Score = 122 bits (134), Expect = 1e-21 Identities = 176/247 (71%), Gaps = 6/247 (2%) Strand=Plus/Minus Query 724896 TCGTACTCGTCCTTTATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCA 724955 |||||||| || | || |||||||| ||||||||||| |||||| || | | | Sbjct 1234213 TCGTACTCTTCGTACATTTACAAGGTCCTCAAGCAGGTCCACCCCGACACTGGT-----A 1234159 Query 724956 TCCTCCAACAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATC 725015 || || |||||| ||||| | || | ||||||||||| |||||| |||| ||||| Sbjct 1234158 TC-TCGAACAAGGCCATGGCCATTCTCAACTCGTTTGTTGCCGACATTTTCGAGCGCATT 1234100 Query 725016 GGCACCGAGGCCGGTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAG 725075 | ||||||||| || ||| | |||| | ||| || || |||| ||| Sbjct 1234099 GCCACCGAGGCTTCCAAGCTCGCGTCGTACAACCACCGCTCGACCATTTCGTCGCGTGAG 1234040 Query 725076 ATCCAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAG 725135 |||||||| ||||| || || || | | ||| ||||| ||| ||||||| | |||||| Sbjct 1234039 ATCCAGACTGCCGTCCGTCTCATTCTCCCCGGTGAACTCTCCAAGCACGCCATTTCCGAG 1233980 Query 725136 GGCACCA 725142 ||||||| Sbjct 1233979 GGCACCA 1233973 >seq18 Length=639095 Score = 154 bits (170), Expect = 2e-31 Identities = 214/291 (74%), Gaps = 13/291 (4%) Strand=Plus/Plus Query 1455991 TTTTACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATC 1456050 || ||||| |||||||| || || |||||||||||||| || ||||||||||||||| Sbjct 159285 TTCTACGGCTTCCAGATTATGATGGAGAACATCCACTCTGAGACGTACTCGCTCCTGATC 159344 Query 1456051 GACACCTACGTCAAGGACCCGGTCGAGAAGGAC-CACCTCTTTCGCGCCATCGACACGGT 1456109 ||||| ||| | ||| | || | |||| |||| || ||| || || ||| | Sbjct 159345 GACACGTACATTCGCGACAATG-CGCGCCGGACGTACCTGTTCAACGCGATTGAGACGAT 159403 Query 1456110 GCCGTCGGTGAGGAAAAAGGCCGACTGGGCGATGAAGTGGAT---CAACAAGGAGGGCCT 1456166 |||| | | ||| ||||||||||||||| || ||||| || | || | Sbjct 159404 CCCGTGCATCAAGAAGAAGGCCGACTGGGCGCTGCGCTGGATTTCGGACGAAAAG----T 159459 Query 1456167 CGACACTTTGCCGAGCGGCTCGTCGGCTTTGCCG-CGTCGAGGGCATCTTTTTCTCGGGC 1456225 | || |||||||||||| || | | ||||| | ||||||||||||||| || || ||| Sbjct 159460 CTAC-CTTTGCCGAGCGCCTGATTGCGTTTGCGGCCGTCGAGGGCATCTTCTTTTCCGGC 159518 Query 1456226 AGTTTCTGCG-CCATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275 || |||| ||||||||||||||||||||||||| |||||||| || || Sbjct 159519 TCGTT-TGCGTCCATCTTTTGGCTCAAGAAGCGCGGTCTCATGCCGGGCCT 159568 Score = 154 bits (170), Expect = 2e-31 Identities = 193/258 (75%), Gaps = 10/258 (4%) Strand=Plus/Plus Query 1456521 AGATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGG 1456580 |||| ||| |||||| ||| |||| ||| ||||||| ||| ||| |||| || ||| Sbjct 159676 AGATTATCCGCGAGGCGGTCAAGATTGAGCAAGAGTTCCTCACCGACGCGCTCCCCGTGT 159735 Query 1456581 CGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCG 1456640 ||||||| ||||||||| | | ||||||||||||||||||||| ||| ||||||||||| Sbjct 159736 CGCTCATTGGCATGAACTCGAA-GCTCATGTGCCAGTACATTGAGTTT-GTCGCCGACCG 159793 Query 1456641 CCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGA---CGGCCAACCCGTTCCCAT 1456697 ||| |||| || |||||| | | ||| | ||| | || ||||| ||| | Sbjct 159794 CCTCCTCGTCGCCCTCGGCAATG-ACAAGATTT---GGAACTCTGCAAACCCCTTCGACT 159849 Query 1456698 GGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGTGGC-GAGT 1456756 |||||| |||| || ||| |||||||| | |||||||||||| ||||| | | | Sbjct 159850 TTATGGAGATGATTTCCCTCCAGGGCAAGGCAAACTTTTTCGAGTCGCGCGTCTCGGCAT 159909 Query 1456757 ACGCCAAGGCCGGCGTCA 1456774 || | ||||| ||||||| Sbjct 159910 ACTCGAAGGCTGGCGTCA 159927 >seq11 Length=1217804 Score = 98.7 bits (108), Expect = 1e-14 Identities = 165/236 (70%), Gaps = 2/236 (1%) Strand=Plus/Minus Query 2133515 CCTGGCCGACGCCGTCGGCGGCGCCCTCTTTGACGAGGCGTCGGACGAGATGGTGACGGT 2133574 ||||| ||||| || || |||| |||||| ||||| || |||||||| | || Sbjct 131436 CCTGGTCGACGTGATCAACGACGCCGTCTTTGCCGAGGACCACGAGGAGATGGTCATTGT 131377 Query 2133575 GCGCGATATTGACTTTTTCTCCATGTGCGAGCACCACCTGCTGCCCTTTATCGGCAAGGC 2133634 || || |||||| | |||||| | |||||||||||||| ||||||||| |||||| Sbjct 131376 CCGTGACATTGACGTGTTCTCCCTCTGCGAGCACCACCTTGTGCCCTTTACCGGCAAAAT 131317 Query 2133635 CCACGTGGGCTACCTGCCC-GCGGGCAAGATCATCGGTCTGAGCAAGATCCCGCGCATCG 2133693 | | || ||| | ||| | ||| | | |||| || |||||| || | ||||| | Sbjct 131316 TTCCATTGGTTACATCCCCAACAGGCTCG-TGCTCGGCCTCAGCAAGCTCGCCCGCATTG 131258 Query 2133694 TCGACATGTTTTCCGACCGCTTCCAAGTACAGGAGGCACTCACGCGCCAGATCGCC 2133749 ||| | |||||| ||| |||| || |||||| ||||| ||| ||||| Sbjct 131257 CCGAGACCTTTTCCCGCCGTCTCCAGGTCCAGGAGCGCCTCACCAAGCAGGTCGCC 131202 >seq21 Length=360382 Score = 95.1 bits (104), Expect = 2e-13 Identities = 85/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 165750 GCAGACCTGGTCACGTGGGGCGCCGTCGGTGCGCGCACCACCGAGAGCCAGGTGCACCGC 165809 || |||||| ||||||||||| | || ||||||||||||||| ||||||||||| Sbjct 220197 GCCGACCTGTCGGCGTGGGGCGCCATTGGCGCGCGCACCACCGAGTCGCAGGTGCACCGT 220256 Query 165810 GAGATGGCGTCGGCGCTGCCGCTGCCCATTGGCTTCAAAAACAGCAC 165856 ||| | |||||||||||| || || | | |||||||| ||| |||| Sbjct 220257 GAGCTCGCGTCGGCGCTGTCGATGAGCGTCGGCTTCAAGAACGGCAC 220303 >seq2 Length=3829864 Score = 95.1 bits (104), Expect = 2e-13 Identities = 96/119 (81%), Gaps = 6/119 (5%) Strand=Plus/Plus Query 1456194 TTTGCC-GCGTCGAGGGCATCTTTTTCTC-GGGCAGTTT-CTGCGCCATCTTTTGGCTCA 1456250 |||||| | || ||||||||||| || || |||| |||| || || ||||||||||||| Sbjct 2322272 TTTGCCTGTGTGGAGGGCATCTTCTTTTCTGGGCCGTTTGCT--GCAATCTTTTGGCTCA 2322329 Query 1456251 AGAAGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCAACGAATTTATCAGTCGCGACGA 1456309 |||||||||||||||||| |||||| | ||| ||||| | ||||| |||||||| Sbjct 2322330 AGAAGCGCGGCCTCATGCGTGGTCTTACG-TTTTCAAACGAGCTCATCAGCCGCGACGA 2322387 >seq6 Length=2162681 Score = 93.3 bits (102), Expect = 6e-13 Identities = 198/288 (69%), Gaps = 16/288 (6%) Strand=Plus/Plus Query 1601131 CGAGCGGAAGCCGCCGCGGTCGACAAAGTCCTGCTTGAGCACGAGCGAGTCCTCCTGGTT 1601190 ||||||||| |||||||||||| || ||| || | | || |||||| |||||||| Sbjct 1755481 CGAGCGGAACAGGCCGCGGTCGACCGAGCTCTGGTTCATAATGACCGAGTCTTCCTGGTT 1755540 Query 1601191 GTAG---GGGTCGCTCATGATGGCCACGCGCGCATTCTGGCCCATCGGGAGGCGCGTGGC 1601247 ||| | || || ||||||||| || || || || |||| |||| || || || Sbjct 1755541 GTAACCAGAGTAGCACATGATGGCAACAATTGCGTTTTG-CCCAGCGGGGAGCTCG--GC 1755597 Query 1601248 GCCGATGACGTCCTCCATGGCG---GTCTGCACCAGCGGCACCTGCGGGTAGCACAGGGC 1601304 ||| || || ||| | ||| | |||| || |||||||||| ||||| Sbjct 1755598 AAACTTGAGGTACTTCATCGACTGCGTCGTCGCCAGTGGTGACTGCGGGTAGTACAGGAT 1755657 Query 1601305 GTGCGACACCGTGTCGATG-GCA--TGGTCGGCGTTGAGCGACACGACGGCCTTGCTCTG 1601361 || | || |||||| ||| ||| |||| | | || | || | || || ||| Sbjct 1755658 GTTGGCCATCGTGTCCATGCGCAGCTGGTAGTTTGTCAGGTA---GATGCCCATGGCCTG 1755714 Query 1601362 CTTGCCCATGGCCGTCTGGTAGATGTTGCGCGGCGCCTGGTTGTGGTT 1601409 |||||||||||||| |||||| |||| ||||||| |||| |||||| Sbjct 1755715 CTTGCCCATGGCCGACTGGTATGTGTTACGCGGCGACTGG-GGTGGTT 1755761 >seq7 Length=1438143 Score = 86.0 bits (94), Expect = 9e-11 Identities = 89/117 (76%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 165750 GCAGACCTGGTCACGTGGGGCGCCGTCGGTGCGCGCACCACCGAGAGCCAGGTGCACCGC 165809 || ||| || | |||||||| || | || ||||| || |||||| ||| | |||||| Sbjct 594465 GCCGACTTGATTACGTGGGGTGCGATTGGCGCGCGTACGACCGAGTCTCAGCTTCACCGC 594406 Query 165810 GAGATGGCGTCGGCGCTGCCGCTGCCCATTGGCTTCAAAAACAGCACCGACGGCAGC 165866 ||| | ||||| | || || | ||||| |||||||| ||| |||||||||||||| Sbjct 594405 GAGCTTGCGTCTGGTCTCTCGTTCCCCATCGGCTTCAAGAACGGCACCGACGGCAGC 594349 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177807824185670