Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20guehoae_20[genbank_20GCA_5F001600415.1_202016- 03-01] 35 sequences; 33,698,914 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq18 102 1e-16 seq2 96.9 5e-15 >seq18 Length=639095 Score = 102 bits (112), Expect = 1e-16 Identities = 110/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 39616 GCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 39675 ||| || ||||| || || ||||| || | ||| | ||||| || || ||||| Sbjct 159626 GCACGCAAAGTCGGTGTGCAGACCCTCGTCGCGCGAAATGAGCTCGTTGGAGAAGGTGAG 159567 Query 39676 TCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAA 39735 || ||||| ||||| ||||| ||||||||||| |||| ||||| || || |||||||| Sbjct 159566 GCCCGGCATGAGACCGCGCTTCTTGAGCCAAAAGATGGACGCAAACGAGCCGGAAAAGAA 159507 Query 39736 GATGCCTTCTACTGCTGCAAATGCAA 39761 |||||| || || || ||||| |||| Sbjct 159506 GATGCCCTCGACGGCCGCAAACGCAA 159481 >seq2 Length=3829864 Score = 96.9 bits (106), Expect = 5e-15 Identities = 110/148 (74%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 39614 AAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTG 39673 ||||| || ||||| ||| ||||| || | || || | ||||| ||||| || Sbjct 2322414 AAGCACGCAAAGTCGGTATGGGTTCCCTCGTCGCGGCTGATGAGCTCGTTTGAAAACGTA 2322355 Query 39674 AGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAG 39733 || ||| |||| || || ||||| ||||||||||| || |||||||| | ||||||||| Sbjct 2322354 AGACCACGCATGAGGCCGCGCTTCTTGAGCCAAAAGATTGCAGCAAACGGCCCAGAAAAG 2322295 Query 39734 AAGATGCCTTCTACTGCTGCAAATGCAA 39761 |||||||| || || ||||| |||| Sbjct 2322294 AAGATGCCCTCCACACAGGCAAACGCAA 2322267 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686908499477400