Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20guehoae_20[genbank_20GCA_5F001600415.1_202016- 03-01] 35 sequences; 33,698,914 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq18 89.7 4e-13 seq7 82.4 6e-11 >seq18 Length=639095 Score = 89.7 bits (98), Expect = 4e-13 Identities = 139/199 (70%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 27050 CGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACC 27109 ||| || || || || || ||||| || || |||| |||| |||||||| || || Sbjct 12683 CGTCGACTCCTTCTGGATGTTGTAATCAGACAATGTGCGGCCGTCCTCGAGCTGCTTTCC 12624 Query 27110 GGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTT 27169 ||| ||||||||||||| || || || || | ||||| || || ||||||| | || Sbjct 12623 CGCGAAAATGAGACGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCCTGGATCTTGCTCTT 12564 Query 27170 CAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGT 27229 || | | || | ||||| | | || || || || || || | ||||| || || || Sbjct 12563 CACGTTGTCGATCGTGTCGGAAGACTCGACCTCAAGGGTGATGGTCTTGCCGGTAAGGGT 12504 Query 27230 TTTCACAAAGATTTGCATA 27248 || || ||||| |||||| Sbjct 12503 CTTGACGAAGATCTGCATA 12485 Score = 84.2 bits (92), Expect = 2e-11 Identities = 87/114 (76%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 27050 CGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACC 27109 ||| || || || || || ||||||||| || | |||| |||| |||||||| || || Sbjct 13106 CGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCCTCGAGCTGCTTGCC 13047 Query 27110 GGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTT 27163 |||| | ||||||||||| || ||||| || | |||||| || || |||||| Sbjct 13046 GGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTT 12993 >seq7 Length=1438143 Score = 82.4 bits (90), Expect = 6e-11 Identities = 79/99 (80%), Gaps = 2/99 (2%) Strand=Plus/Minus Query 96930 AACGGCTGCACTTCGGCCGGCGAACATTTCAACCCTACATTGCAA-AATCACGGCGCACC 96988 ||||||||||| |||||||||| || |||||||| || |||| || ||||||| || Sbjct 194126 AACGGCTGCACCTCGGCCGGCGCCCACTTCAACCC-CCACGGCAAGAACCACGGCGGCCC 194068 Query 96989 CAGCGCCATTGAACGCCACGTTGGTGATCTGGGCAACGT 97027 || || || || |||||||| ||||| || |||||||| Sbjct 194067 CACCGACACCGAGCGCCACGTCGGTGACCTCGGCAACGT 194029 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424934218738920