Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20guehoae_20[genbank_20GCA_5F001600415.1_202016- 03-01] 35 sequences; 33,698,914 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq18 147 3e-30 seq1 143 3e-29 seq14 96.9 4e-15 seq2 89.7 6e-13 >seq18 Length=639095 Score = 147 bits (162), Expect = 3e-30 Identities = 339/496 (68%), Gaps = 16/496 (3%) Strand=Plus/Minus Query 122379 GACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATAAAGTCAAA 122438 ||| ||| ||| || ||||| | ||| || | ||| ||| | ||||||||||| || Sbjct 159902 GACGCGCGACTCGAAAAAGTTTGCCTTGCCCTGGAGGGAAATCATCTCCATAAAGTCGAA 159843 Query 122439 TGGATTCTTCGCGTTCCAAATGGGTGGCACC-CCAACTTGTTTGAGGAGACGATCCGACA 122497 || || | ||||||||| || || || | |||||| || || | | Sbjct 159842 GGGGTTTGCAGAGTTCCAAATCT-TGTCATTGCCGAGGGCGACGAGGAGGCGGTCGGCGA 159784 Query 122498 CATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGGTTACATGGG-AGT 122556 || |||||||||||| | |||| || |||||||| || ||||| ||| ||| || Sbjct 159783 CAAACTCAATGTACTGGCACATGAGCTTCGAGTTCATGCCAATGAGCG-ACACGGGGAGC 159725 Query 122557 GCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGGCGTGGATAGTT 122616 ||||| || |||| ||| |||||||| |||||||| | || || ||| || Sbjct 159724 GCGTCGGTGAGGAACTCTTGCTCAATCTTGACCGCCTCGCGGATAATCTTGTTGATCGTG 159665 Query 122617 TCGGTAGTG-GGTCTATTACGCAAAGTCTTGAAGAGCTC-CACGGCAAACTCCTGGTGGA 122674 || | ||| || | ||| ||||||| |||| |||| || ||| | Sbjct 159664 TCCGG-GTGCGGGCGGCGCTGCAGGTGGGTGAAGAGGAGGCACG-CAAAGTCGGTGTGCA 159607 Query 122675 GACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACCCCGCT 122734 ||||||| || || ||||| || || || |||||| || || ||||||||||| |||| Sbjct 159606 GACCCTCGTCGCGCGAAATGAGCTCGTTGGAGAAGGTGAGGCCCGGCATGAGACCGCGCT 159547 Query 122735 TCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCA 122793 |||| | |||| | || | |||| || || ||||| |||||||| ||||| || |||| Sbjct 159546 TCTTGAGCCAAAAGATGGACGCA-AACGAGCCGGAAAAGAAGATGCCCTCGACGGCCGCA 159488 Query 122794 AACGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTGCATC---AAACCATTTCATTGCC 122850 ||||||| ||||| ||||| |||| ||||||| | || || ||| || ||| Sbjct 159487 AACGCAATCAGGCGCTCGGCAAAGG---TAGACTTTTCGTCCGAAATCCAGCGCAGCGCC 159431 Query 122851 CATTTCGCCTTCTTCT 122866 || | |||||||||| Sbjct 159430 CAGTCGGCCTTCTTCT 159415 >seq1 Length=3969531 Score = 143 bits (158), Expect = 3e-29 Identities = 672/1051 (64%), Gaps = 37/1051 (4%) Strand=Plus/Plus Query 111053 TCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCA 111112 || || ||||| || ||||| | ||| | || | ||| ||||| || || || || || Sbjct 1696285 TCGGCAAGACCCTGGACACCAAGACCGACGGGGCGGTGACGCATGTTCGAGTTGCGAGC- 1696343 Query 111113 GTCTCA---ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATC 111169 ||| ||||| || | || | | |||||| ||| || || ||||| | | | Sbjct 1696344 --CTCGGGCACGGGGTAGTAGTTGCGGGTAATGACCTGGTCGAGGTTCTTGGTGATGACC 1696401 Query 111170 TTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTT 111229 ||||| || || || || || | | || | || | ||| |||||| | Sbjct 1696402 TTTGTAATGTCGTGGAGCTTCTGGAAGTCGTAGGTCTGGTCCTCAAAGTTGACAAAGGCC 1696461 Query 111230 GGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAA 111289 || ||||| || || || | ||||| || || ||| || | |||||| | Sbjct 1696462 GGGAGGGCAATGGACGCAAGGTTGCAGACGGCGACCTCGTCGGGCGACGAGTACTCGATG 1696521 Query 111290 ATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTG 111349 || || || || | |||||| ||| ||||| || | | || ||||| ||| || Sbjct 1696522 ATCTCAGTGCAGAGGTTGGACGACTTGATCGTGCCGAGGTGCTGCTGGTTCGACTTGCTG 1696581 Query 111350 TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATA 111409 ||| ||| ||||||||||||||| |||| || ||||| ||||| | | |||||| Sbjct 1696582 TTGGCCGCGTCCTTGTAGAGCATGAAGGGACCGCCAGTCTCAGTCTGAGCCTCGAGAATG 1696641 Query 111410 GCCTTCCAAA-CATCGGCGGCTGGTACAATGGCGTTG--GCCCGTCCCTCCGC-CTCGTA 111465 || ||| | | | ||| || | || | ||| |||| | || | | |||||| Sbjct 1696642 GCAAACCAGAGCTTTTGCGCCTTG----ATCGTCTTGCGGCCCTTGCCGGCACGCTCGTA 1696697 Query 111466 CTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCG--CGTCGGAGAGACCTGGTGCCTTG 111523 | |||||| | || || ||||| | | | | |||| ||| || || || | Sbjct 1696698 GCTCAGGTAGAGCTCCTCGAATTCCTC--CGAGTGGACATCGGCGAGGCCGGGGCACTCG 1696755 Query 111524 TCTGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGA 111583 | || || | || | ||| | ||| | ||| || ||||||||||| ||||| || Sbjct 1696756 GCGGGGCACATGAGCGTCCAGTCACCGTCCATCTCGACACGCTTCATGAACAGGTCGGGG 1696815 Query 111584 ATCCACAGGGATGAAAAGAGATCTCTA-CACCGAGCCTCTTCGTCACCTTGGTTGAGTCG 111642 |||||||| | | ||||| || | | ||| || | || || | || ||||| || Sbjct 1696816 ATCCACAGCGCGTAGAAGAGGTCACGAGCACGGA-CTTCCTCCTTGCCGTGGTTCTTGCG 1696874 Query 111643 TAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC 111702 | || ||||| || | || || |||||||| ||||| || |||| || | | || Sbjct 1696875 GAGGTCGAGGAAGTCAAAGACGTCGGCGTGCCAGGGCTCGAGGTAGATGGCAAAGGCACC 1696934 Query 111703 ------CTT-TCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAA 111755 ||| | | ||||| | | || | || || || || || | | | || | Sbjct 1696935 TGGGCGCTTGTTGCCGCCCTGGTCGA----CGTAACGGGCCGTCGCATCGTAGGCACGGA 1696990 Query 111756 GCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAAT--ACGAGATTTATTGGC 111813 |||| || | ||||| | || | || || || ||| ||| ||||| | |||| Sbjct 1696991 GCATGGGGACGATACCGTTCGAGTAGCCGTTGGTACCCGCAATGTACGAGCCCT--TGGC 1697048 Query 111814 TCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTC 111873 | | | || ||||| | |||||||| ||||| ||| ||||| |||||||| Sbjct 1697049 ACGAATGTTGTGAATGTGGAGACCAATACCACCAGCAGTCTTGGAGATCTGCGCACAGGT 1697108 Query 111874 CGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACT 111933 | | || || | ||||| |||| || ||||| ||||| | |||| |||||||| Sbjct 1697109 CTTGAGCGTGTCGTAGATGCCGTCAATCGAGTCGTCCTTCATCGCGACGAGGAAGCACGA 1697168 Query 111934 GGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACAT 111993 ||||| || | || ||||| || ||||||||||| || | ||||| | || | Sbjct 1697169 CGACATTTGTGCGTGCGGGGTACCGGCGTTGAAGAGGGTGGGCGACGCGTGCGT-AAAGT 1697227 Query 111994 ACCTTG-GGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGC 112052 | | | ||||| || ||| ||||| | || ||||||| || |||||||| | Sbjct 1697228 AGCGCGACGACATGAGGTTGTAGGTCTCGAGAACCTTTTCAATGTTGTCGCCGTGGATAC 1697287 Query 112053 CGATTGCGACCCGCATGAACATGTACTGTGG 112083 ||| || || ||||| | ||||| ||| || Sbjct 1697288 CGACGGCAACACGCATAAGCATGTGCTGGGG 1697318 >seq14 Length=1065811 Score = 96.9 bits (106), Expect = 4e-15 Identities = 218/322 (68%), Gaps = 8/322 (2%) Strand=Plus/Minus Query 11630 GCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGA 11689 || |||||||| || || |||| || || || || | ||| || | |||| || Sbjct 789108 GCGTCAATCTCGTCGATAAAGATGATGCAGGGGGCGTTCTTGCGCGCCGTCGCAAACAGG 789049 Query 11690 TCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTTTGCGGCAGAGCAC 11749 ||||| || | || || ||||| ||||||||||||||||| | | | ||| || Sbjct 789048 TCGCGCACACGCGAGGGGCCGACACCGACAAACATCTCCACAAACTCGGAACCCGAG-AC 788990 Query 11750 TGG-ATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTTCCCGT 11808 | | ||| || || |||| || ||||| | || ||| || || ||||| || || Sbjct 788989 GGACAGGAACGGCACCTTTGCCTCGCCCGCAGTCGCCTTGGCAAGCAGCGTCTTACCGGT 788930 Query 11809 ACCTGGCTTACCCGCGAGAAGGGCGCCTCGGGGGATCTTGGCACCA--CTTC-CAAAATA 11865 ||| ||| || | ||||| ||| || ||||| |||||||||||| |||| | | | Sbjct 788929 ACCGGGCGGGCCAGAGAGAATGGCACCGCGGGGAATCTTGGCACCAAGCTTCTCGTACTT 788870 Query 11866 TCTCTCGGGTTGCTTGAGAAAATCCACAATCTCTTCAAGTTCATCTTTGGCCGCGTCAAT 11925 ||| || | |||||| || | |||| ||| | || || || ||| |||| || Sbjct 788869 GCTC---GGCTCCTTGAGGAACTTGACAAACTCCATGATCTCCTCCTTTGCCTCGTCCAT 788813 Query 11926 CCCCTCAACATCACTGAAGCGG 11947 ||| |||| || | ||||||| Sbjct 788812 GCCCGCAACGTCGCGGAAGCGG 788791 >seq2 Length=3829864 Score = 89.7 bits (98), Expect = 6e-13 Identities = 146/204 (72%), Gaps = 5/204 (2%) Strand=Plus/Minus Query 122677 CCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACCCCGCTTC 122736 ||||| || ||| || || || ||||| || ||||| ||||||| || |||||| Sbjct 2322390 CCCTCGTCGCGGCTGATGAGCTCGTTTGAAAACGTAAGACCACGCATGAGGCCGCGCTTC 2322331 Query 122737 TTCAACCAATAAATAGC-GCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAA 122795 || | |||| | || || ||| || | ||| || |||||||| ||||||||||| ||||| Sbjct 2322330 TTGAGCCAAAAGATTGCAGCA-AACGGCCCAGAAAAGAAGATGCCCTCCACACAGGCAAA 2322272 Query 122796 CGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTGCATCAAACCATTTCATTGCCCATTT 122855 ||||| ||||| | ||||| || | | || | || | || | ||||| | Sbjct 2322271 CGCAATCAGGCGCGTGCGGAAGG-GC-ATATCGGGCGT-AATGTACTTGAGCGCCCAGTC 2322215 Query 122856 CGCCTTCTTCTCAATACATGGTAC 122879 |||||||||| ||||||||||| Sbjct 2322214 GGCCTTCTTCTGGATACATGGTAC 2322191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031725236000